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The focus of this work is a detailed flow analysis of the roughness-induced velocity fluctuations and vortex shedding. The results are compared to experimental data on roughness-induced transition for the same roughness geometries. The key findings are summarized as follows: a) The current Navier-Stokes algorithm is capable of predicting unsteady velocity fluctuations and vortex shedding induced by large-scale roughness; b) The calculated fluctuation intensity values show reasonable correspondence with experimental turbulence intensity values for the roughness and Reynolds numbers 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