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A complex connection \\(D\\) (i.e., \\(DJ=0\\)) on an almost complex manifold \\((M,J)\\) is called of Nijenhuis type if \\(T^{1,1}=0\\), where \\(T\\) is the torsion of \\(D\\). A map \\(\\phi:(M,J)\\to (N,h)\\) is called generalized pluriharmonic if it satisfies the equation \\((\\nabla d\\phi)^{1,1}=0\\) where \\(\\nabla\\) is the connection on the bundle \\(T^*M\\otimes\\phi^*TN\\) induced by a Nijenhuis-type complex connection \\(D\\) on \\((M,J)\\) and the Levi-Civita connection \\(\\nabla^h\\) of \\((N,h)\\). If \\((M,g)\\) and \\((N,h)\\) are pseudo-Riemannian manifolds then a smooth map \\(\\phi:M\\to N\\) is called harmonic if \\(\\mathrm{tr}_g\\nabla d\\phi=0\\) where \\(\\nabla\\) is the connection on \\(T^*M\\otimes\\phi^*TN\\) induced by the Levi-Civita connections \\(\\nabla^g,\\nabla^h\\). The author proves that if \\((M,J,g)\\) is nearly K\u00e4hler then a generalized pluriharmonic map \\(\\phi:(M,J)\\to (N,h)\\) is a harmonic map \\(\\phi:(M,g)\\to (N,h)\\). An associated family for \\(\\phi:(M,J)\\to (N,h)\\) is a family of maps \\(\\phi :M\\to N,\\in \\mathbb R\\) such that \\(\\Psi\\circ d\\phi=d\\phi\\circ R\\) where \\(R=\\exp(J)\\) and \\(\\Psi\\) is some bundle isomorphism \\(\\Psi:\\phi^*TN\\to\\phi^*TN\\) which is parallel with respect to \\(\\nabla^h\\), i.e., \\(\\Psi\\circ \\phi^*\\nabla^h=\\phi^*\\circ\\Psi\\). Using the twistor theory the author proves that if \\((N^{2n},h)\\) is a Riemannian manifold and \\(\\mathcal Z\\) is its twistor space then \\(p:(\\mathcal Z,J_2)\\to N\\) is pluriharmonic, where \\(J_2\\) is the standard almost complex structure on \\(\\mathcal Z\\) and gives examples of generalized pluriharmonic maps from the twistor space \\(\\phi:(\\mathcal Z(S^{2n}),J_2)\\to S^{2n}\\) and \\(\\phi:(\\mathcal Z_r(\\mathbb CP^{n}),J_2)\\to \\mathbb CP^{n}\\) which do not admit an associated family. The author also proves that if \\((\\mathcal Z,g,J)\\) is a twistor space of a positive quaternionic K\u00e4hler manifold \\(N\\) and \\(J\\) is a canonical nearly K\u00e4hler structure then the projection \\(P:\\mathcal Z\\to N\\) is a generalized pluriharmonic map which does not admit an associated 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