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The best-proportioned knot in a given knot class may be determined by the gradient flow of the energy. Indeed, Blatt showed the global existence and convergence of the gradient flow of the M\u00f6bius energy near stationary points. The Lojasiewicz inequality played an important role in proving this result. The inequality is derived from \\(L^2\\) representation of the first and second variations. On the other hand, Ishizeki and Nagasawa showed that the M\u00f6bius energy can decomposed into three parts that are M\u00f6bius invariant. Each part has an \\(L^2\\) representation of the first variation.  In this paper, the author discusses the \\(L^2\\) representation of the second variation for each decomposed part of the M\u00f6bius energy, and derive explicit formulas for it. 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