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Usually, the low-dimensional equation is derived by assuming that the three-dimensional wave function is approximately factorised into a ground state of the respective strongly confining transverse potential, multiplied by an arbitrary finction of time and the remaining unconfined coordinate(s).  This paper addresses a situation when the confinement is not very strong, hence one should approximate the three-dimensional wave function by a combination of several terms, each being a product of the ground state (\\(k=0\\)) or one of excited states (\\(k\\geq 1\\)) of the confining potential, times respective arbitrary functions \\(\\varphi_k\\) of time and remaining coordinate(s), \\(x\\). The so derived truncated system of equations takes the following general form:   \\[  i\\frac{\\partial\\varphi_k}{\\partial t} = H_{\\perp}\\varphi_k + \\sum \\gamma_{klmn} \\varphi_l\\varphi_n\\varphi_m^{*},  \\]   where \\( H_{\\perp}\\) is the Hamiltonian acting on coordinates \\(x\\) in the linear approximation, the asterisk stands for the complex conjugations, and coupling coefficients \\(\\gamma_{klmn}\\) are determined by overlapping integrals of respective eigenstates of the confining potential. The paper elaborates a method for numerical simulations of this coupled nonlinear system (in fact, for the system of four equations). The method is based on a pseudo-spectral Hermite-expansion technique, combined with a Crank-Nicolson scheme. Numerical experiments are presented for the case when the remaining unconfined space is one-dimensional (which corresponds to the ``cigar-shaped'' trap), and results are compared to those obtained by means of an alternative 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