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It was created to benchmarking algorithms for gene regulatory network inference in Pratapa et al. (2020).  Task: The collection can be used to study causal inference algorithms.  Summary:  Size of collection: 400 datasets on 6 - 19 features of different size Task: Causal Inference Problem Data Type: Mixed Data Dataset Scope: Collection of Datasets Ground Truth: Known Graph Temporal Structure: Static Data License: CC BY-NC 4.0 (see 10.5281/zenodo.3701939) Missing Values: No Missing Values   Missingness Statement: There are no missing values.  Collection: (for a detailed description see Peng et al. (2024), for simulation details see Pratapa et al. (2020))  Curated: There are experiments on four curated gene regulatory networks:mCAD (Mammalian Cortical Area Development, 14 edges and 5 nodes), VSC (Ventral Spinal Cord Development, 15 edges and 8 nodes), HSC (Hematopoietic Stem Cell Differentiation, 30 edges and 11 nodes), and GSD (Gonadal Sex Determination, 79 edges and 18 nodes). Synthetic: There are experiments six synthetic gene regulatory networks: dyn-BF (Bifurcating, 12 edges and 5 nodes), dyn-BFC (Bifurcating Converging, 18 edges and 9 nodes), dyn-CY (Cycle, 6 edges and 5 nodes), dyn-LI (Linear, 8 edges and 7 nodes), dyn-LL (Linear Long, 19 edges and 18 nodes), and dyn-TF (Trifurcating, 20 edges and 7 nodes).   Files per Experiment:  GroundTruth.csv: This file represents the actual biological regulatory interactions between genes, typically derived from known databases, literature, or synthetic models. An edge weight of +1 represents activation, -1 represents inhibition. refNetwork.csv: This file is a processed version of the ground truth network, keeping only the sign (+ or -) of interactions. ExpressionData.csv:This file contains the RNAseq data, with genes as rows and cell IDs as columns. PseudoTime.csv: This file contains the Pseudotime. It is a computationally inferred measure that orders single cells along a trajectory to represent their progression through a biological process, such as differentiation or development.","type":"string"},"datatype":"string"},"type":"statement","id":"Q4834871$B042CFD1-5657-4B1E-9CED-C6FCB92E2EF0","rank":"normal"}],"P1460":[{"mainsnak":{"snaktype":"value","property":"P1460","hash":"d1e8073b72a070520efd3d14d4b3d2d3d03859e2","datavalue":{"value":{"entity-type":"item","numeric-id":5984635,"id":"Q5984635"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q4834871$C07E01F8-DCFC-4092-B14A-34641A3FC4DB","rank":"normal"}],"P27":[{"mainsnak":{"snaktype":"value","property":"P27","hash":"054af73e563ccd81a6b4c3bd99912a59beaca519","datavalue":{"value":"10.5281/ZENODO.7682713","type":"string"},"datatype":"external-id"},"type":"statement","id":"Q4834871$54E0D468-2ACD-4849-8499-029EC6FB672E","rank":"normal"}]},"sitelinks":{"mardi":{"site":"mardi","title":"BEELINE","badges":[],"url":"https://portal.mardi4nfdi.de/wiki/BEELINE"}}}}}