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algorithm is given, valid for a class of affine \\(D\\)-modules which includes the holonomic \\(D\\)-modules, for computing cohomology groups of the restriction of a \\(D\\)-module to a linear subvariety. This algorithm uses a free resolution of the \\(D\\)-module, whose construction in turn depends on the previously established Gr\u00f6bner basis theory for the Weyl algebra . Two versions of constructing the free resolution are given, one of which has been implemented in the second author's system \\textbf{kan} since 1994, but is written up here for the first time. (The source code of \\textbf{kan} is available from www.math.kobe-u.ac.jp/KAN.) As applications of the basic algorithm, algorithms for computing tensor product, localization, and algebraic local cohomology groups of holonomic systems are obtained. Such algorithms have been previously known only for very special cases. NEWLINENEWLINENEWLINEA further interesting application is to calculation of certain de Rham cohomology groups; see the authors' paper: \\textit{T. Oaku} and \\textit{N. Takayama}, J. Pure Appl. 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