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Tree sequences can be decompressed as follows:  $ tsunzip 1kg_chr1.trees.tsz  Once decompressed, trees files can be loaded and processed usingtskit.  import tskit ts = tskit.load(\"1kg_chr1.trees\") # ts is an instance of tskit.TreeSequence  print(\"Chromosome 1 contains {} trees\".format(ts.num_trees))  Metadata associated with individuals and populations was derived from the originalsourceand converted to JSON form. For example, to access individual metadata we can use:  import tskit import json ts = tskit.load(\"1kg_chr1.trees\") ind = ts.individual(0) metadata_dict = json.loads(ind.metadata)  The metadata_dict variable will now containall the metadata for the individual with ID 0 as a dictionary. Metadata associated with populations can be found in a similar way. Population IDs are associated with individuals via their constituent nodes. For example,  pop_metadata = [json.loads(pop.metadata) for pop in ts.populations()] ind_node = ts.node(ind.nodes[0]) ind_pop_metadata = pop_metadata[ind_node.population]  After this, theind_pop_metadata variable will contain the population level metadata for individual ID 0.  The full data pipeline used to generate these tree sequences and associated metadata is available on GitHub.","type":"string"},"datatype":"string"},"type":"statement","id":"Q6682872$253413C0-14FB-4E17-98D3-FCA95294929E","rank":"normal"}],"P28":[{"mainsnak":{"snaktype":"value","property":"P28","hash":"76aea2b75495bec6f97e62ffc31f2b341286902a","datavalue":{"value":{"time":"+2019-05-20T00:00:00Z","timezone":0,"before":0,"after":0,"precision":11,"calendarmodel":"http://www.wikidata.org/entity/Q1985727"},"type":"time"},"datatype":"time"},"type":"statement","id":"Q6682872$154EC441-DD15-41FC-822D-488CF0448510","rank":"normal"}],"P16":[{"mainsnak":{"snaktype":"value","property":"P16","hash":"e539c5a80e437d703b47434ae23d190dc78a9f80","datavalue":{"value":{"entity-type":"item","numeric-id":71126,"id":"Q71126"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6682872$EBFC33BA-0C5E-47C1-8B8B-10F77BE03D79","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"0d0d77a0d03c71fd7546038d410d07175a3c9da7","datavalue":{"value":{"entity-type":"item","numeric-id":71110,"id":"Q71110"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6682872$C30D7FF4-2464-4798-9D84-C3E20F0ACD46","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"489b83bf3de57674053ff206397ac94bad7317fc","datavalue":{"value":{"entity-type":"item","numeric-id":71108,"id":"Q71108"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6682872$EC7A002D-0EAB-47F6-A15E-D24AE14B8FF9","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"0b3fd7fe439e5adc0bb579992e983ec2f489b580","datavalue":{"value":{"entity-type":"item","numeric-id":71129,"id":"Q71129"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6682872$37363432-B7ED-412D-A7C9-C35BC2D8F075","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"361299da028ad634d8bb422589fa872e5a615fa2","datavalue":{"value":{"entity-type":"item","numeric-id":71130,"id":"Q71130"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6682872$9AE7BBD7-E002-4566-9EDE-88A920F17F43","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"17eb43105a66bae6b9079b0ef4a6e45e5af45645","datavalue":{"value":{"entity-type":"item","numeric-id":2962076,"id":"Q2962076"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6682872$A855BA32-9AEF-49B8-8A43-B375EF24C3AC","rank":"normal"}],"P227":[{"mainsnak":{"snaktype":"value","property":"P227","hash":"f35cb7223797ab28f842f6e829fb33615d9eee2c","datavalue":{"value":"3051855","type":"string"},"datatype":"external-id"},"type":"statement","id":"Q6682872$E2EC1E2A-36EA-4DFA-8048-2EBC48B5F178","rank":"normal"}],"P27":[{"mainsnak":{"snaktype":"value","property":"P27","hash":"72437e93ca9e4c44179ac64d44b090ff7ab14d88","datavalue":{"value":"10.5281/zenodo.3051855","type":"string"},"datatype":"external-id"},"type":"statement","id":"Q6682872$49BB33DB-00DD-444A-8181-C00C1CB537F2","rank":"normal"}],"P163":[{"mainsnak":{"snaktype":"value","property":"P163","hash":"45fcd4163b5f33e6e8c784f5522d7246c0a1a61e","datavalue":{"value":{"entity-type":"item","numeric-id":57056,"id":"Q57056"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6682872$9F483A07-51F0-41D2-9B58-398DFE38236D","rank":"normal"}],"P1474":[{"mainsnak":{"snaktype":"value","property":"P1474","hash":"9828656774b0531597a635a46438869928ecc18d","datavalue":{"value":"1.0.0","type":"string"},"datatype":"string"},"type":"statement","id":"Q6682872$AD6E63E4-B93C-45FD-87F0-EBF5EF6AE125","rank":"normal"}],"P1460":[{"mainsnak":{"snaktype":"value","property":"P1460","hash":"d1e8073b72a070520efd3d14d4b3d2d3d03859e2","datavalue":{"value":{"entity-type":"item","numeric-id":5984635,"id":"Q5984635"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6682872$C7008C2C-BB06-41BF-AC92-055080AFC7F7","rank":"normal"}]},"sitelinks":{"mardi":{"site":"mardi","title":"Inferring whole-genome histories in large population datasets: inferred tree sequences for 1000 Genomes","badges":[]}}}}}