{"entities":{"Q6692336":{"pageid":14411316,"ns":120,"title":"Item:Q6692336","lastrevid":54738566,"modified":"2026-01-29T20:22:17Z","type":"item","id":"Q6692336","labels":{"en":{"language":"en","value":"Deep-sequence phylogenetics to quantify patterns of HIV transmission in the context of a universal testing and treatment trial \u2013 BCPP/ Ya Tsie trial"}},"descriptions":{"en":{"language":"en","value":"Dataset published at Zenodo repository."}},"aliases":{},"claims":{"P31":[{"mainsnak":{"snaktype":"value","property":"P31","hash":"dae155fd0809a7906855cd4fa50dd7d71bed552b","datavalue":{"value":{"entity-type":"item","numeric-id":56885,"id":"Q56885"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6692336$10DC8B5A-71D5-4D7E-A1BF-0EA3953C4F13","rank":"normal"}],"P1459":[{"mainsnak":{"snaktype":"value","property":"P1459","hash":"573516982dee8eadbe8a38c03f057c720141feaa","datavalue":{"value":"Background: Mathematical models predict that community-wide access to HIV testing-and-treatment can rapidly and substantially reduce new HIV infections. Yet several large universal test-and-treat HIV prevention trials in high-prevalence epidemics demonstrated variable reduction in population-level incidence. Methods: To elucidate patterns of HIV spread in universal test-and-treat trials we quantified the contribution of geographic-location, gender, age and randomized-HIV-intervention to HIV transmissions in the 30-community Ya Tsie trial in Botswana (estimated trial population: 175,664). Results: Deep-sequence phylogenetic analysis revealed that most inferred HIV transmissions within the trial occurred within the same or between neighboring communities, and between similarly-aged partners. Transmissions into intervention communities from control communities were more common than the reverse post-baseline (30% [12.2 \u2013 56.7] versus 3% [0.1 \u2013 27.3]) than at baseline (7% [1.5 \u2013 25.3] versus 5% [0.9 \u2013 22.9]) compatible with a benefit from treatment-as-prevention. Conclusion: Our findings suggest that population mobility patterns are fundamental to HIV transmission dynamics and to the impact of HIV control strategies. Funding: This study was supported by the National Institute of General Medical Sciences (U54GM088558); the Fogarty International Center (FIC) of the U.S. National Institutes of Health (D43 TW009610); and the President's Emergency Plan for AIDS Relief through the Centers for Disease Control and Prevention (CDC) (Cooperative agreements U01 GH000447 and U2G GH001911).","type":"string"},"datatype":"string"},"type":"statement","id":"Q6692336$5FAE2FEB-7B4A-4672-989F-53A243783AEF","rank":"normal"}],"P28":[{"mainsnak":{"snaktype":"value","property":"P28","hash":"4a4e3c5db867c7f2fe481c8476644db023ac3f71","datavalue":{"value":{"time":"+2022-02-23T00:00:00Z","timezone":0,"before":0,"after":0,"precision":11,"calendarmodel":"http://www.wikidata.org/entity/Q1985727"},"type":"time"},"datatype":"time"},"type":"statement","id":"Q6692336$EFAF8B66-F292-4686-8B72-19417BA09380","rank":"normal"}],"P16":[{"mainsnak":{"snaktype":"value","property":"P16","hash":"4e8abab879af43d97a10838cf898ee14b04e1693","datavalue":{"value":{"entity-type":"item","numeric-id":126553,"id":"Q126553"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6692336$727FE567-AE18-47E8-B273-17F0761C31A5","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"42ce2fd5d415ee07fd4912e1a61107c7492495ac","datavalue":{"value":{"entity-type":"item","numeric-id":6692321,"id":"Q6692321"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6692336$C2FFD11D-EF92-4A1B-A67B-4906BEB8A37A","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"e2b5027f2a58371fe33a640cda703aa39b75cb60","datavalue":{"value":{"entity-type":"item","numeric-id":6692322,"id":"Q6692322"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6692336$01E1C971-D708-40C0-BFD4-C1964E004474","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"dfbfc93a59486957e9d6622203f8139f1fe0914e","datavalue":{"value":{"entity-type":"item","numeric-id":6692323,"id":"Q6692323"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6692336$8892BE81-EC59-44B9-9E6D-E17B7DC5EC05","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"c67a95463aa646689d542322d3b7696a99b10f82","datavalue":{"value":{"entity-type":"item","numeric-id":6692324,"id":"Q6692324"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6692336$B462517E-103A-47B9-B671-15952BEBCD8D","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"2d3330c9d4fc12a52f1ec44485de8ad17fc18031","datavalue":{"value":{"entity-type":"item","numeric-id":6692325,"id":"Q6692325"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6692336$1E5B578F-572E-4B48-84C2-F0F09ACEB2EE","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"2782dfae9ab1ce02d80172bd494d13693daea946","datavalue":{"value":{"entity-type":"item","numeric-id":6692326,"id":"Q6692326"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6692336$748686E9-CDC3-4F0E-B5D3-4996320A93A2","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"d67baba8826fd14a3d9249e0e65ca7db0865a877","datavalue":{"value":{"entity-type":"item","numeric-id":6692327,"id":"Q6692327"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6692336$8C34182A-4D60-4F7B-AEEC-2149551282AA","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"b932242ec3aacd85e9e82a1dd4652397d83b049d","datavalue":{"value":{"entity-type":"item","numeric-id":6692328,"id":"Q6692328"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6692336$0CEEF75D-9E96-44B4-80A2-2744C129FE80","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"79ab130529b2f35e28b122c54c7745f499ad7329","datavalue":{"value":{"entity-type":"item","numeric-id":6692329,"id":"Q6692329"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6692336$F7A115FA-8483-4528-B163-024F08C40D1A","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"de70abccb8116016d14ccb3d8024beedece2b6da","datavalue":{"value":{"entity-type":"item","numeric-id":6692330,"id":"Q6692330"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6692336$FDF1DB07-0246-4596-92DC-5B5DBDE4B933","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"961504f793d3bc7b71b669f853f1456951789854","datavalue":{"value":{"entity-type":"item","numeric-id":6692331,"id":"Q6692331"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6692336$245A3637-7B73-4DA8-AC08-DF55F276267E","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"37898abafa7da37fc74c85f2a44e8bdb82dec847","datavalue":{"value":{"entity-type":"item","numeric-id":6692332,"id":"Q6692332"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6692336$703CBF26-4BD1-48F1-B0A2-8933550B50AC","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"397bd75cb2db92add8f882253e06f34be84a0a61","datavalue":{"value":{"entity-type":"item","numeric-id":6692333,"id":"Q6692333"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6692336$1FF9433E-2AEC-4B50-A41E-BE84FFE0D9B6","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"b6d6e98aaf7e29e7d631d9797bfe366b902830b5","datavalue":{"value":{"entity-type":"item","numeric-id":6692334,"id":"Q6692334"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6692336$CC5D2640-DF76-4167-877E-DDE0B8850D36","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"33847727a227549afb300fb6a907f750b93171ae","datavalue":{"value":{"entity-type":"item","numeric-id":6692335,"id":"Q6692335"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6692336$C92202B5-4D18-4DD5-A460-E7DCFFCE590F","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"47bc028e427a624e211b3ca9eb6880d437ae018f","datavalue":{"value":{"entity-type":"item","numeric-id":158498,"id":"Q158498"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6692336$FFBCD2FB-74F4-44AB-B543-D2D6978EE208","rank":"normal"}],"P227":[{"mainsnak":{"snaktype":"value","property":"P227","hash":"d2af6c2eaf1104ab4c45b066689edad5112e8fc9","datavalue":{"value":"6247827","type":"string"},"datatype":"external-id"},"type":"statement","id":"Q6692336$A1BE6BBF-65DC-434B-AED6-BB470DB6D047","rank":"normal"}],"P27":[{"mainsnak":{"snaktype":"value","property":"P27","hash":"d5d9cac2a87d55a697761fb6348364bed6cf2258","datavalue":{"value":"10.5281/zenodo.6247827","type":"string"},"datatype":"external-id"},"type":"statement","id":"Q6692336$41C3F9A4-C30D-4DEE-B25A-7D2FD0C25CB0","rank":"normal"}],"P1460":[{"mainsnak":{"snaktype":"value","property":"P1460","hash":"d1e8073b72a070520efd3d14d4b3d2d3d03859e2","datavalue":{"value":{"entity-type":"item","numeric-id":5984635,"id":"Q5984635"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6692336$8CAFD88D-7EDB-4B62-8862-2A26335B17D2","rank":"normal"}]},"sitelinks":{"mardi":{"site":"mardi","title":"Deep-sequence phylogenetics to quantify patterns of HIV transmission in the context of a universal testing and treatment trial \u2013 BCPP/ Ya Tsie trial","badges":[],"url":"https://portal.mardi4nfdi.de/wiki/Deep-sequence_phylogenetics_to_quantify_patterns_of_HIV_transmission_in_the_context_of_a_universal_testing_and_treatment_trial_%E2%80%93_BCPP/_Ya_Tsie_trial"}}}}}