{"entities":{"Q6720103":{"pageid":14439049,"ns":120,"title":"Item:Q6720103","lastrevid":54821051,"modified":"2026-01-29T21:04:59Z","type":"item","id":"Q6720103","labels":{"en":{"language":"en","value":"Supporting Dataset for \"Impacts of Degradation on Water, Energy, and Carbon Cycling of the Amazon Tropical Forests\""}},"descriptions":{"en":{"language":"en","value":"Dataset published at Zenodo repository."}},"aliases":{},"claims":{"P31":[{"mainsnak":{"snaktype":"value","property":"P31","hash":"dae155fd0809a7906855cd4fa50dd7d71bed552b","datavalue":{"value":{"entity-type":"item","numeric-id":56885,"id":"Q56885"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6720103$AB92ABE4-CF62-426C-85B3-AA960877F7DB","rank":"normal"}],"P1459":[{"mainsnak":{"snaktype":"value","property":"P1459","hash":"043dd91cbfc1e1e905e1678bffb0533467e4ffb0","datavalue":{"value":"This data set is a supplement for:  Longo, M., S. S. Saatchi, M. Keller, K. W. Bowman, A. Ferraz, P. R. Moorcroft, D. Morton, D. Bonal, P. Brando, B. Burban, G. Derroire, M. N. dos-Santos, V. Meyer, S. R. Saleska, S. Trumbore, and G. Vin- cent, 2020: Impacts of degradation on water, energy, and carbon cycling of the Amazon tropical forests. J. Geophys. Res.-Biogeosci., 125 (8), e2020JG005 677, doi:10.1029/2020JG005677.  This data set contains the following files (which should be all downloaded and uncompressed in the same root directory):    00_SiteLidar.zip  R scripts to process forest inventory plots and Airborne LiDAR point clouds. Sub-directories contains a directory Template, which should be copied for each site for which data are to be processed.  01_LidarSynthesis.zip  R scripts to fit the statistical models of aggregated properties, and to evaluate both the statistical model and the prediction of Airborne LiDAR profiles to be used to initialize ED-2.2.  02_model_eval.zip  R scripts to compare the ED-2.2 model output and evaluate the model against tower observations.  03_degrad_mtr  R scripts to visualize the ED-2.2 simulation results.  InputData  Miscellaneous data to be used by the scripts.  Util  Additional R scripts     Rsc  Mostly R functions, whichmay be called by other R scripts   OutsideLAS  List of plots that were not fully overlapped by the Airborne LiDAR surveys   GenMERRA2_ED2  Utility scripts to process MERRA-2 to generate the met drivers needed by ED-2.2   GenMSWEP2_ED2 Utility scripts to process MSWEP-2.2 to generate the met drivers needed by ED-2.2      ED2IN_Config  list of ED2IN files used in the runs.     To see the input data used for this analysis, load any of the objects available in 01_LidarSynthesis/01_eval_multivar, and look for the following structures:    List of variables and units of data structure census[[1]], rlidar[[1]], and tchdat[[1]].         Variable    Structure    Description    Units              identifier    census[[1]], rlidar[[1]], tchdat[[1]]    Plot identifier. This always has the site identifier (see below), the area within each site, the nominal year of the campaign, the unique sub-plot ID (Pxx_Byy for rectangular plots, and Txx_Pyy for long transects)              iata        census[[1]], rlidar[[1]],tchdat[[1]]            Site identifier:          115: Km 115 of BR-163 highway, PA, BRA     ana:Anamb, PA, BRA     and: Fazenda Andiroba, PA, BRA     bon:Fazenda Bonal, AC, BRA     cau:Fazenda Cauaxi, PA, BRA     duc:Reserva Ducke, AM, BRA     fc2: Feliz Natal (zone C, area 2), MT, BRA     fd1: Feliz Natal(zone D, area 1), MT, BRA     fd2: Feliz Natal(zone D, area 2), MT, BRA     fd3: Feliz Natal(zone D, area 3), MT, BRA     fn2:Feliz Natal (long transect 2), MT, BRA     fna:Feliz Natal (zone A), MT, BRA     fst:Sarac-Taquera National Forest, PA,BRA     gf1:Paracou (Guyaflux plots), GUF     gf2:Paracou (Logging experiment plots), GUF     hum: Fazenda Humait, AC, BRA     jm2:Jamari National Forest (area 2), RO, BRA     jm3:Jamari National Forest (area 3), RO, BRA     par:Fazenda Nova Neonita, PA, BRA     sbe:                      local    census[[1]], rlidar[[1]],tchdat[[1]]        Region identifier (used for regional cross-validation):          bte: Belterra, PA, BRA     duc:Manaus (Reserva Ducke), AM, BRA     fst:Sarac-Taquera National Forest, PA, BRA     fzn:Feliz Natal, MT, BRA     gyf:Paracou, GUF     jam: Jamari National Forest, RO, BRA     prg: Paragominas, PA, BRA     rib:Rio Branco, AC, BRA     sfx:So Flix do Xingu, PA, BRA     tan:Tanguro, MT, BRA     sbe: Southeastern Belterra, PA, BRA     sx1: So Flix do Xingu (area 1), PA, BRA     sx2: So Flix do Xingu (area 2), PA, BRA     tac:Tom-Au, PA, BRA     tal: Fazenda Talism, AC, BRA     tn1: Fazenda Tanguro (Sustainable Landscapes transects), MT, BRA     tn2: Fazenda Tanguro (fire experiment transects), MT, BRA     tp1: Tapajs National Forest, PA, BRA     tp2:So Jorge (area 2), PA, BRA     tp3:So Jorge (area 3), PA, BRA                      poi    census[[1]], rlidar[[1]],tchdat[[1]]    Nominal size of each plot              when    census[[1]], rlidar[[1]],tchdat[[1]]    Date of measurement              col    census[[1]], rlidar[[1]],tchdat[[1]]    Colour associated with plot (for plotting only)              pch    census[[1]], rlidar[[1]],tchdat[[1]]    Symbol associated with plot (for plotting only)              dist.key    census[[1]], rlidar[[1]],tchdat[[1]]        Disturbance flag:          bnm: Burnt multiple times     bno: Burnt once     cvl: Conventional logging     int: Intact (minimally disturbed) forest     lbn: Logged and burnt once     lth:Logged and thinned     ril: Reduced-impact logging     sbn: Secondarygrowth then burnt     sec:Secondary growth     ukn:Unknown/Unclassified                      dist.age    census[[1]], rlidar[[1]],tchdat[[1]]    Age since last disturbance    yr          dist.col    census[[1]], rlidar[[1]],tchdat[[1]]    Colour associated with disturbance (for plotting only)              dist.pch    census[[1]], rlidar[[1]],tchdat[[1]]    Symbol associated with disturbance (for plotting only)              agb.std    census[[1]]    Above-ground biomass of individuals with DBH  10 cm    kgC m2          ba.std    census[[1]]    Basal area of individuals with DBH  10 cm    cm2 m2          lai.std    census[[1]]    Potential (allometry-based) leaf area index of individuals with DBH  10 cm    m2 m2          nplant.std    census[[1]]    Stem number density of individuals with DBH  10 cm    m2          elev.mean    rlidar[[1]]    Mean elevation of point cloud return distribution (all returns)    m          elev.sdev    rlidar[[1]]    Standard deviation of point cloud return distribution (all returns)    m          elev.skew    rlidar[[1]]    Skewness of point cloud return distribution (all returns)    m          elev.kurt    rlidar[[1]]    Kurtosis of point cloud return distribution (all returns)    m          elev.p01    rlidar[[1]]    1stpercentile of the point cloud return distribution (all returns)    m          elev.p05    rlidar[[1]]    5thpercentile of the point cloud return distribution (all returns)    m          elev.p10    rlidar[[1]]    10thpercentile of the point cloud return distribution (all returns)    m          elev.p25    rlidar[[1]]    25thpercentile of the point cloud return distribution (all returns)    m          elev.p50    rlidar[[1]]    50thpercentile (median) of the point cloud return distribution (all returns)    m          elev.p75    rlidar[[1]]    75thpercentile of the point cloud return distribution (all returns)    m          elev.p90    rlidar[[1]]    90thpercentile of the point cloud return distribution (all returns)    m          elev.p95    rlidar[[1]]    95thpercentile of the point cloud return distribution (all returns)    m          elev.p99    rlidar[[1]]    99thpercentile of the point cloud return distribution (all returns)    m          elev.iqr    rlidar[[1]]    Interquartile range of the point cloud return distribution (all returns)    m          elev.max    rlidar[[1]]    Maximum of the point cloud return distribution (all returns)    m          fcan.elev.1.0.to.2.5.m    rlidar[[1]]    Fraction of returns between 1.0 and 2.5 m    fraction [0-1]          fcan.elev.2.5.to.5.0.m    rlidar[[1]]    Fraction of returns between 2.5 and 5.0 m    fraction [0-1]          fcan.elev.5.0.to.7.5.m    rlidar[[1]]    Fraction of returns between 5.0 and 7.5 m    fraction [0-1]          fcan.elev.7.5.to.10.0.m    rlidar[[1]]    Fraction of returns between 7.5 and 10.0 m    fraction [0-1]          fcan.elev.10.0.to.15.0.m    rlidar[[1]]    Fraction of returns between 10.0 and 15.0 m    fraction [0-1]          fcan.elev.15.0.to.20.0.m    rlidar[[1]]    Fraction of returns between 15.0 and 20.0 m    fraction [0-1]          fcan.elev.20.0.to.25.0.m    rlidar[[1]]    Fraction of returns between 20.0 and 25.0 m    fraction [0-1]          fcan.elev.25.0.to.30.0.m    rlidar[[1]]    Fraction of returns between 25.0 and 30.0 m    fraction [0-1]          fcan.elev.above.1.0.m    rlidar[[1]]    Fraction of returns above 1.0 m    fraction [0-1]          fcan.elev.above.2.5.m    rlidar[[1]]    Fraction of returns above 2.5 m    fraction [0-1]          fcan.elev.above.5.0.m    rlidar[[1]]    Fraction of returns above 5.0 m    fraction [0-1]          fcan.elev.above.7.5.m    rlidar[[1]]    Fraction of returns above 7.5 m    fraction [0-1]          fcan.elev.above.10.0.m    rlidar[[1]]    Fraction of returns above 10.0 m    fraction [0-1]          fcan.elev.above.15.0.m    rlidar[[1]]    Fraction of returns above 15.0 m    fraction [0-1]          fcan.elev.above.20.0.m    rlidar[[1]]    Fraction of returns above 20.0 m    fraction [0-1]          fcan.elev.above.25.0.m    rlidar[[1]]    Fraction of returns above 25.0 m    fraction [0-1]          fcan.elev.above.30.0.m    rlidar[[1]]    Fraction of returns above 30.0 m    fraction [0-1]          ztch    tchdat[[1]]    Mean top canopy height (0.25ha average from 1-m pixels)    m","type":"string"},"datatype":"string"},"type":"statement","id":"Q6720103$55E18509-93CC-42CD-BFE4-CD8C5811F6D1","rank":"normal"}],"P28":[{"mainsnak":{"snaktype":"value","property":"P28","hash":"e8a6b6e7667615d98165be2b867062973831b168","datavalue":{"value":{"time":"+2020-02-02T00:00:00Z","timezone":0,"before":0,"after":0,"precision":11,"calendarmodel":"http://www.wikidata.org/entity/Q1985727"},"type":"time"},"datatype":"time"},"type":"statement","id":"Q6720103$664A880F-B719-403E-86F9-98E1EE0B764F","rank":"normal"}],"P16":[{"mainsnak":{"snaktype":"value","property":"P16","hash":"b30630ca936db0c9ca3ca01206ebd308bceb9b70","datavalue":{"value":{"entity-type":"item","numeric-id":6691094,"id":"Q6691094"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6720103$C2535178-6B31-4EE0-A625-BF1B95BA39B0","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"b0f107af110bc18b20b6b3e8ad97dd0e090e41de","datavalue":{"value":{"entity-type":"item","numeric-id":6672386,"id":"Q6672386"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6720103$EF587D4B-158D-4B2A-9ECF-BD9989691AD9","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"9b0c7d43562278275fdb4bc73edc4451a7746343","datavalue":{"value":{"entity-type":"item","numeric-id":6720096,"id":"Q6720096"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6720103$9C51424C-D025-4B41-9D40-BA508A700EC4","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"2e456baaa789f8f03d01e485afe0bb682dbf5481","datavalue":{"value":{"entity-type":"item","numeric-id":6697439,"id":"Q6697439"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6720103$2C483D5E-1DBA-4E4A-8F14-A9C76D4B2004","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"c1d68bf3f01e9c6a05170405ea53f3f897adae6b","datavalue":{"value":{"entity-type":"item","numeric-id":6720097,"id":"Q6720097"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6720103$E557019D-80FD-4633-848F-71CBFAF82E17","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"8bfd8e7b7dc54a38a0da86885835871e6df3af70","datavalue":{"value":{"entity-type":"item","numeric-id":6720098,"id":"Q6720098"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6720103$EBEE0AC0-4FCB-40DB-8915-7B2833ACEE23","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"34a262afcd9341fad7079539c530f41f71059847","datavalue":{"value":{"entity-type":"item","numeric-id":6720099,"id":"Q6720099"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6720103$0102EEFB-C3C9-4460-BAB5-8379C79F2A9D","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"15c2c02c70d380d4d8217991f12230d0b1a65f4a","datavalue":{"value":{"entity-type":"item","numeric-id":6720100,"id":"Q6720100"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6720103$C2404507-25A2-433D-9569-B612373170F8","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"6432c1e8cb6a9b3fa465d047fb844bd93957d2d8","datavalue":{"value":{"entity-type":"item","numeric-id":6697442,"id":"Q6697442"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6720103$7C14498A-C3DD-47BB-9FF1-392D1D10BD21","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"c59c24b726d3de047cd62ce20a8ccedea85e1c84","datavalue":{"value":{"entity-type":"item","numeric-id":6720101,"id":"Q6720101"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6720103$948960BE-0638-47C3-A216-C5A7DEEB51FB","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"6f2fe41497b966a3ae8b5ffb4bc129b8a93150ca","datavalue":{"value":{"entity-type":"item","numeric-id":6720102,"id":"Q6720102"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6720103$1D5D73DC-8403-4DA6-AB6F-6770EAC1E8B7","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"e0c52b11608521be06d870e9a5860d514a0c5e68","datavalue":{"value":{"entity-type":"item","numeric-id":5981031,"id":"Q5981031"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6720103$E2BDA360-42CC-40C9-AC6E-85B97C4D5E0E","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"fcd4a5a3d930b73adc44c92fcfab5ff50d91aa11","datavalue":{"value":{"entity-type":"item","numeric-id":6691113,"id":"Q6691113"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6720103$0E07DE04-46F5-4DE5-B244-FC07A722FE32","rank":"normal"},{"mainsnak":{"snaktype":"value","property":"P16","hash":"986d92985022982c4bef2ee1f9d2a48f9288ecfe","datavalue":{"value":{"entity-type":"item","numeric-id":6691124,"id":"Q6691124"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6720103$622DB16A-2959-4383-833E-31768EC473D2","rank":"normal"}],"P227":[{"mainsnak":{"snaktype":"value","property":"P227","hash":"882498796dcbf8ec110c25c6e2a96b77909ea158","datavalue":{"value":"3634131","type":"string"},"datatype":"external-id"},"type":"statement","id":"Q6720103$1AEB1F9B-BFB8-408B-AAA4-8F4D58EBC30F","rank":"normal"}],"P27":[{"mainsnak":{"snaktype":"value","property":"P27","hash":"ba4d261ea4c45121fc2889b8add221b69dbaf413","datavalue":{"value":"10.5281/zenodo.3634131","type":"string"},"datatype":"external-id"},"type":"statement","id":"Q6720103$613EE92C-CE4C-4EB3-A048-2D6DFD2B25AF","rank":"normal"}],"P163":[{"mainsnak":{"snaktype":"value","property":"P163","hash":"45fcd4163b5f33e6e8c784f5522d7246c0a1a61e","datavalue":{"value":{"entity-type":"item","numeric-id":57056,"id":"Q57056"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6720103$F7E766A5-982D-40F6-9DBB-626A905F6E56","rank":"normal"}],"P1460":[{"mainsnak":{"snaktype":"value","property":"P1460","hash":"d1e8073b72a070520efd3d14d4b3d2d3d03859e2","datavalue":{"value":{"entity-type":"item","numeric-id":5984635,"id":"Q5984635"},"type":"wikibase-entityid"},"datatype":"wikibase-item"},"type":"statement","id":"Q6720103$23C697B7-12E4-4514-8B81-9B0E6182A856","rank":"normal"}]},"sitelinks":{"mardi":{"site":"mardi","title":"Supporting Dataset for \"Impacts of Degradation on Water, Energy, and Carbon Cycling of the Amazon Tropical Forests\"","badges":[],"url":"https://portal.mardi4nfdi.de/wiki/Supporting_Dataset_for_%22Impacts_of_Degradation_on_Water,_Energy,_and_Carbon_Cycling_of_the_Amazon_Tropical_Forests%22"}}}}}