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G/U is a compact simply connected real analytic manifold which carries G-invariant complex structures. If U is a maximal torus in G or if U is a subgroup with 1-dimensional center then M has a unique G- invariant complex structure (Borel-Hirzebruch). The author considers the irreducible case, i.e. the case where G is a simple compact Lie group: the G-invariant complex structures are classified on an irreducible compact simple connected manifold \\(M=G/U\\). Each equivalence class of such structures gives rise to a pair of simple root systems \\((\\pi,\\pi_ 0)\\), \\(\\pi_ 0\\) a subsystem of \\(\\pi\\), \\((\\pi,\\pi_ 0)\\) uniquely determined up to equivalence. The author gives the classification of the pairs \\((\\pi,\\pi_ 0)\\) associated with G/U. This is used in particular to compute the number of equivalence classes of G-invariant complex structures on 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