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Property / last update
15 March 2023
Timestamp+2023-03-15T00:00:00Z
Timezone+00:00
CalendarGregorian
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Property / last update: 15 March 2023 / rank
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Property / programmed in
 
Property / programmed in: R / rank
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Property / author
 
Property / author: Jesse A Goodrich / rank
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Property / maintained by
 
Property / maintained by: Jesse A Goodrich / rank
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Property / copyright license
 
Property / copyright license: GNU General Public License / rank
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Property / depends on software
 
Property / depends on software: R / rank
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Property / imports: data.table / rank
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Property / imports: ggplot2 / rank
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Property / imports: lme4 / rank
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Property / imports: lmerTest / rank
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Property / imports: qgcomp / rank
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Property / cites work
 
Property / cites work: Meeting-in-the-middle using metabolic profiling – a strategy for the identification of intermediate biomarkers in cohort studies / rank
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Property / cites work
 
Property / cites work: A Quantile-Based g-Computation Approach to Addressing the Effects of Exposure Mixtures / rank
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Property / software version identifier
 
0.0.1
Property / software version identifier: 0.0.1 / rank
 
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publication date: 9 January 2023
Timestamp+2023-01-09T00:00:00Z
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1.1.0
Property / software version identifier: 1.1.0 / rank
 
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publication date: 26 February 2024
Timestamp+2024-02-26T00:00:00Z
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Precision1 day
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Property / instance of: R package / rank
 
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Property / programmed in: R / rank
 
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Property / maintained by: Jesse A Goodrich / rank
 
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Property / last update
 
26 February 2024
Timestamp+2024-02-26T00:00:00Z
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Property / description
 
A collection of fast and flexible functions for analyzing omics data in observational studies. Multiple different approaches for integrating multiple environmental/genetic factors, omics data, and/or phenotype data are implemented. This includes functions for performing omics wide association studies with one or more variables of interest as the exposure or outcome; a function for performing a meet in the middle analysis for linking exposures, omics, and outcomes (as described by Chadeau-Hyam et al., (2010) <doi:10.3109/1354750X.2010.533285>); and a function for performing a mixtures analysis across all omics features using quantile-based g-Computation (as described by Keil et al., (2019) <doi:10.1289/EHP5838>).
Property / description: A collection of fast and flexible functions for analyzing omics data in observational studies. Multiple different approaches for integrating multiple environmental/genetic factors, omics data, and/or phenotype data are implemented. This includes functions for performing omics wide association studies with one or more variables of interest as the exposure or outcome; a function for performing a meet in the middle analysis for linking exposures, omics, and outcomes (as described by Chadeau-Hyam et al., (2010) <doi:10.3109/1354750X.2010.533285>); and a function for performing a mixtures analysis across all omics features using quantile-based g-Computation (as described by Keil et al., (2019) <doi:10.1289/EHP5838>). / rank
 
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Property / author
 
Property / author: Jesse A Goodrich / rank
 
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Property / copyright license
 
Property / copyright license: GNU General Public License / rank
 
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Property / copyright license: GNU General Public License / qualifier
 
edition/version: ≥ 3 (English)
Property / imports
 
Property / imports: data.table / rank
 
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Property / imports: ggplot2 / rank
 
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Property / imports: ggrepel / rank
 
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Property / imports: qgcomp / rank
 
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Property / imports: stats / rank
 
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Property / imports
 
Property / imports: survival / rank
 
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Property / cites work
 
Property / cites work: Meeting-in-the-middle using metabolic profiling – a strategy for the identification of intermediate biomarkers in cohort studies / rank
 
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Property / cites work
 
Property / cites work: A Quantile-Based g-Computation Approach to Addressing the Effects of Exposure Mixtures / rank
 
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Property / depends on software
 
Property / depends on software: R / rank
 
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Property / depends on software: R / qualifier
 
Property / MaRDI profile type
 
Property / MaRDI profile type: MaRDI software profile / rank
 
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links / mardi / namelinks / mardi / name
 

Latest revision as of 19:55, 12 March 2024

Analysis of Omics Data in Observational Studies
Language Label Description Also known as
English
epiomics
Analysis of Omics Data in Observational Studies

    Statements

    1.0.0
    15 March 2023
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    0.0.1
    9 January 2023
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    1.1.0
    26 February 2024
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    0 references
    0 references
    26 February 2024
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    A collection of fast and flexible functions for analyzing omics data in observational studies. Multiple different approaches for integrating multiple environmental/genetic factors, omics data, and/or phenotype data are implemented. This includes functions for performing omics wide association studies with one or more variables of interest as the exposure or outcome; a function for performing a meet in the middle analysis for linking exposures, omics, and outcomes (as described by Chadeau-Hyam et al., (2010) <doi:10.3109/1354750X.2010.533285>); and a function for performing a mixtures analysis across all omics features using quantile-based g-Computation (as described by Keil et al., (2019) <doi:10.1289/EHP5838>).
    0 references
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    0 references
    0 references
    0 references
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    0 references