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7 February 2023
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1.0.5
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publication date: 14 June 2022
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publication date: 15 June 2022
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1.1.0
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publication date: 31 August 2022
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publication date: 16 January 2023
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2 February 2024
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Integrated species distribution modeling is a rising field in quantitative ecology thanks to significant rises in the quantity of data available, increases in computational speed and the proven benefits of using such models. Despite this, the general software to help ecologists construct such models in an easy-to-use framework is lacking. We therefore introduce the R package 'PointedSDMs': which provides the tools to help ecologists set up integrated models and perform inference on them. There are also functions within the package to help run spatial cross-validation for model selection, as well as generic plotting and predicting functions. An introduction to these methods is discussed in Issac, Jarzyna, Keil, Dambly, Boersch-Supan, Browning, Freeman, Golding, Guillera-Arroita, Henrys, Jarvis, Lahoz-Monfort, Pagel, Pescott, Schmucki, Simmonds and O’Hara (2020) <doi:10.1016/j.tree.2019.08.006>.
Property / description: Integrated species distribution modeling is a rising field in quantitative ecology thanks to significant rises in the quantity of data available, increases in computational speed and the proven benefits of using such models. Despite this, the general software to help ecologists construct such models in an easy-to-use framework is lacking. We therefore introduce the R package 'PointedSDMs': which provides the tools to help ecologists set up integrated models and perform inference on them. There are also functions within the package to help run spatial cross-validation for model selection, as well as generic plotting and predicting functions. An introduction to these methods is discussed in Issac, Jarzyna, Keil, Dambly, Boersch-Supan, Browning, Freeman, Golding, Guillera-Arroita, Henrys, Jarvis, Lahoz-Monfort, Pagel, Pescott, Schmucki, Simmonds and O’Hara (2020) <doi:10.1016/j.tree.2019.08.006>. / rank
 
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Property / author: Philip Mostert / rank
 
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Property / author: Bob O'Hara / rank
 
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Property / depends on software: inlabru / rank
 
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Property / imports: ggplot2 / rank
 
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Property / imports: sp / rank
 
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Property / imports: R.devices / rank
 
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Property / cites work: Data Integration for Large-Scale Models of Species Distributions / rank
 
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Latest revision as of 19:56, 12 March 2024

Fit Models Derived from Point Processes to Species Distributions using 'inlabru'
Language Label Description Also known as
English
PointedSDMs
Fit Models Derived from Point Processes to Species Distributions using 'inlabru'

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    1.2.1
    7 February 2023
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    1.0.5
    14 June 2022
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    1.0.6
    15 June 2022
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    1.1.0
    31 August 2022
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    1.1.1
    5 September 2022
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    1.2.0
    16 January 2023
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    1.3.1
    10 October 2023
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    1.3
    10 August 2023
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    1.3.2
    2 February 2024
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    2 February 2024
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    Integrated species distribution modeling is a rising field in quantitative ecology thanks to significant rises in the quantity of data available, increases in computational speed and the proven benefits of using such models. Despite this, the general software to help ecologists construct such models in an easy-to-use framework is lacking. We therefore introduce the R package 'PointedSDMs': which provides the tools to help ecologists set up integrated models and perform inference on them. There are also functions within the package to help run spatial cross-validation for model selection, as well as generic plotting and predicting functions. An introduction to these methods is discussed in Issac, Jarzyna, Keil, Dambly, Boersch-Supan, Browning, Freeman, Golding, Guillera-Arroita, Henrys, Jarvis, Lahoz-Monfort, Pagel, Pescott, Schmucki, Simmonds and O’Hara (2020) <doi:10.1016/j.tree.2019.08.006>.
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