EpiNow2 (Q158530): Difference between revisions

← Older edit

@@ Property / last update @@
-April 2023Timestamp +2023-04-27T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2023-04-27T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / last update: 27 April 2023 / rank @@
-Normal rank
@@ Property / imports @@
-future.apply
@@ Property / imports: future.apply / rank @@
-Normal rank
@@ Property / imports @@
-lubridate
@@ Property / imports: lubridate / rank @@
-Normal rank
@@ Property / imports @@
-patchwork
@@ Property / imports: patchwork / rank @@
-Normal rank
@@ Property / imports @@
-purrr
@@ Property / imports: purrr / rank @@
-Normal rank
@@ Property / imports @@
-R.utils
@@ Property / imports: R.utils / rank @@
-Normal rank
@@ Property / imports @@
-Rcpp
@@ Property / imports: Rcpp / rank @@
-Normal rank
@@ Property / imports @@
-rlang
@@ Property / imports: rlang / rank @@
-Normal rank
@@ Property / imports @@
-rstan
@@ Property / imports: rstan / rank @@
-Normal rank
@@ Property / imports @@
-rstantools
@@ Property / imports: rstantools / rank @@
-Normal rank
@@ Property / imports @@
-scales
@@ Property / imports: scales / rank @@
-Normal rank
@@ Property / imports @@
-truncnorm
@@ Property / imports: truncnorm / rank @@
-Normal rank
@@ Property / cites work @@
-Estimating the time-varying reproduction number of SARS-CoV-2 using national and subnational case counts
-Normal rank
@@ Property / cites work @@
-Practical considerations for measuring the effective reproductive number, Rt
-Normal rank
@@ Property / software version identifier @@
+.1.0
@@ Property / software version identifier: 1.1.0 / rank @@
+Normal rank
@@ Property / software version identifier: 1.1.0 / qualifier @@
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Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2020-09-01T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.2.1
@@ Property / software version identifier: 1.2.1 / rank @@
+Normal rank
@@ Property / software version identifier: 1.2.1 / qualifier @@
+publication date: 20 October 2020Timestamp +2020-10-20T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2020-10-20T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.3.1
@@ Property / software version identifier: 1.3.1 / rank @@
+Normal rank
@@ Property / software version identifier: 1.3.1 / qualifier @@
+publication date: 22 November 2020Timestamp +2020-11-22T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2020-11-22T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.3.2
@@ Property / software version identifier: 1.3.2 / rank @@
+Normal rank
@@ Property / software version identifier: 1.3.2 / qualifier @@
+publication date: 14 December 2020Timestamp +2020-12-14T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2020-12-14T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.3.4
@@ Property / software version identifier: 1.3.4 / rank @@
+Normal rank
@@ Property / software version identifier: 1.3.4 / qualifier @@
+publication date: 12 February 2023Timestamp +2023-02-12T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2023-02-12T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.4.0
@@ Property / software version identifier: 1.4.0 / rank @@
+Normal rank
@@ Property / software version identifier: 1.4.0 / qualifier @@
+publication date: 26 September 2023Timestamp +2023-09-26T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2023-09-26T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / last update @@
+September 2023Timestamp +2023-09-26T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2023-09-26T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / last update: 26 September 2023 / rank @@
+Normal rank
@@ Property / description @@
+Estimates the time-varying reproduction number,    rate of spread, and doubling time using a range of open-source tools    (Abbott et al. (2020) <doi:10.12688/wellcomeopenres.16006.1>), and    current best practices (Gostic et al. (2020)    <doi:10.1101/2020.06.18.20134858>).  It aims to help users avoid some    of the limitations of naive implementations in a framework that is    informed by community feedback and is actively supported.
+Normal rank
@@ Property / author @@
+Sam Abbott
@@ Property / author: Sam Abbott / rank @@
+Normal rank
@@ Property / author @@
+Joel Hellewell
@@ Property / author: Joel Hellewell / rank @@
+Normal rank
@@ Property / author @@
+Katharine Sherratt
@@ Property / author: Katharine Sherratt / rank @@
+Normal rank
@@ Property / author @@
+Katelyn M. Gostic
@@ Property / author: Katelyn M. Gostic / rank @@
+Normal rank
@@ Property / author @@
+Joe Hickson
@@ Property / author: Joe Hickson / rank @@
+Normal rank
@@ Property / author @@
+Hamada S. Badr
@@ Property / author: Hamada S. Badr / rank @@
+Normal rank
@@ Property / author @@
+Michael Dewitt
@@ Property / author: Michael Dewitt / rank @@
+Normal rank
@@ Property / author @@
+Sebastian Funk
@@ Property / author: Sebastian Funk / rank @@
+Normal rank
@@ Property / copyright license @@
+MIT license
@@ Property / copyright license: MIT license / rank @@
+Normal rank
@@ Property / copyright license @@
+File License
@@ Property / copyright license: File License / rank @@
+Normal rank
@@ Property / copyright license: File License / qualifier @@
+URL: https://cran.r-project.org/web/packages/EpiNow2/LICENSE
@@ Property / imports @@
+data.table
@@ Property / imports: data.table / rank @@
+Normal rank
@@ Property / imports @@
+futile.logger
@@ Property / imports: futile.logger / rank @@
+Normal rank
@@ Property / imports: futile.logger / qualifier @@
+software version identifier: ≥ 1.4
@@ Property / imports @@
+future
@@ Property / imports: future / rank @@
+Normal rank
@@ Property / imports @@
+future.apply
@@ Property / imports: future.apply / rank @@
+Normal rank
@@ Property / imports @@
+ggplot2
@@ Property / imports: ggplot2 / rank @@
+Normal rank
@@ Property / imports @@
+lifecycle
@@ Property / imports: lifecycle / rank @@
+Normal rank
@@ Property / imports @@
+lubridate
@@ Property / imports: lubridate / rank @@
+Normal rank
@@ Property / imports @@
+methods
@@ Property / imports: methods / rank @@
+Normal rank
@@ Property / imports @@
+patchwork
@@ Property / imports: patchwork / rank @@
+Normal rank
@@ Property / imports @@
+progressr
@@ Property / imports: progressr / rank @@
+Normal rank
@@ Property / imports @@
+purrr
@@ Property / imports: purrr / rank @@
+Normal rank
@@ Property / imports @@
+R.utils
@@ Property / imports: R.utils / rank @@
+Normal rank
@@ Property / imports: R.utils / qualifier @@
+software version identifier: ≥ 2.0.0
@@ Property / imports @@
+Rcpp
@@ Property / imports: Rcpp / rank @@
+Normal rank
@@ Property / imports: Rcpp / qualifier @@
+software version identifier: ≥ 0.12.0
@@ Property / imports @@
+rlang
@@ Property / imports: rlang / rank @@
+Normal rank
@@ Property / imports: rlang / qualifier @@
+software version identifier: ≥ 0.4.7
@@ Property / imports @@
+rstan
@@ Property / imports: rstan / rank @@
+Normal rank
@@ Property / imports: rstan / qualifier @@
+software version identifier: ≥ 2.26.0
@@ Property / imports @@
+rstantools
@@ Property / imports: rstantools / rank @@
+Normal rank
@@ Property / imports: rstantools / qualifier @@
+software version identifier: ≥ 2.2.0
@@ Property / imports @@
+runner
@@ Property / imports: runner / rank @@
+Normal rank
@@ Property / imports @@
+scales
@@ Property / imports: scales / rank @@
+Normal rank
@@ Property / imports @@
+stats
@@ Property / imports: stats / rank @@
+Normal rank
@@ Property / imports @@
+truncnorm
@@ Property / imports: truncnorm / rank @@
+Normal rank
@@ Property / imports @@
+utils
@@ Property / imports: utils / rank @@
+Normal rank
@@ Property / cites work @@
+Estimating the time-varying reproduction number of SARS-CoV-2 using national and subnational case counts
+Normal rank
@@ Property / cites work @@
+Practical considerations for measuring the effective reproductive number, Rt
+Normal rank
@@ Property / depends on software @@
+R
@@ Property / depends on software: R / rank @@
+Normal rank
@@ Property / depends on software: R / qualifier @@
+software version identifier: ≥ 3.5.0
@@ Property / MaRDI profile type @@
+MaRDI software profile
@@ Property / MaRDI profile type: MaRDI software profile / rank @@
+Normal rank
@@ links / mardi / name / links / mardi / name @@
+Software:158530

Latest revision as of 19:00, 12 March 2024

Estimate Real-Time Case Counts and Time-Varying Epidemiological Parameters

Language	Label	Description	Also known as
English	EpiNow2	Estimate Real-Time Case Counts and Time-Varying Epidemiological Parameters

Statements

instance of

R package

0 references

software version identifier

1.3.5

publication date

27 April 2023

0 references

1.1.0

publication date

1 September 2020

0 references

1.2.1

publication date

20 October 2020

0 references

1.3.1

publication date

22 November 2020

0 references

1.3.2

publication date

14 December 2020

0 references

1.3.4

publication date

12 February 2023

0 references

1.4.0

publication date

26 September 2023

0 references

0 references

0 references

26 September 2023

0 references

description

Estimates the time-varying reproduction number, rate of spread, and doubling time using a range of open-source tools (Abbott et al. (2020) <doi:10.12688/wellcomeopenres.16006.1>), and current best practices (Gostic et al. (2020) <doi:10.1101/2020.06.18.20134858>). It aims to help users avoid some of the limitations of naive implementations in a framework that is informed by community feedback and is actively supported.

0 references

0 references

0 references

0 references

0 references

0 references