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Property / cites work
 
Property / cites work: Spatial reconstruction of single-cell gene expression data / rank
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Property / cites work
 
Property / cites work: Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets / rank
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Property / cites work
 
Property / cites work: Comprehensive Integration of Single-Cell Data / rank
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Property / cites work
 
Property / cites work: Integrated analysis of multimodal single-cell data / rank
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Property / author: Paul J Hoffman / rank
 
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Property / imports: uwot / rank
 
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Property / cites work
 
Property / cites work: Spatial reconstruction of single-cell gene expression data / rank
 
Normal rank
Property / cites work
 
Property / cites work: Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets / rank
 
Normal rank
Property / cites work
 
Property / cites work: Comprehensive Integration of Single-Cell Data / rank
 
Normal rank
Property / cites work
 
Property / cites work: Integrated analysis of multimodal single-cell data / rank
 
Normal rank
Property / MaRDI profile type
 
Property / MaRDI profile type: MaRDI software profile / rank
 
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links / mardi / namelinks / mardi / name
 

Latest revision as of 19:56, 12 March 2024

Tools for Single Cell Genomics
Language Label Description Also known as
English
Seurat
Tools for Single Cell Genomics

    Statements

    last update
    18 November 2022
    0 references
    software version identifier
    4.3.0
    publication date
    18 November 2022
    0 references
    CRAN project
    Seurat
    0 references
    Wikidata QID
    Q85699649
    0 references
    instance of
    R package
    0 references
    programmed in
    R
    0 references
    author
    Paul J Hoffman
    0 references
    copyright license
    MIT license
    0 references
    File License
    0 references
    depends on software
    R
    0 references
    methods
    0 references
    imports
    cluster
    0 references
    cowplot
    0 references
    fitdistrplus
    0 references
    future
    0 references
    future.apply
    0 references
    ggplot2
    0 references
    ggrepel
    0 references
    ggridges
    0 references
    graphics
    0 references
    grDevices
    0 references
    grid
    0 references
    httr
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    ica
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    igraph
    0 references
    irlba
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    jsonlite
    0 references
    KernSmooth
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    leiden
    0 references
    lmtest
    0 references
    MASS
    0 references
    Matrix
    0 references
    matrixStats
    0 references
    miniUI
    0 references
    patchwork
    0 references
    pbapply
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    plotly
    0 references
    png
    0 references
    progressr
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    RANN
    0 references
    RColorBrewer
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    Rcpp
    0 references
    RcppAnnoy
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    reticulate
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    rlang
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    ROCR
    0 references
    Rtsne
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    scales
    0 references
    scattermore
    0 references
    sctransform
    0 references
    SeuratObject
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    shiny
    0 references
    spatstat.explore
    0 references
    spatstat.geom
    0 references
    stats
    0 references
    tibble
    0 references
    tools
    0 references
    utils
    0 references
    uwot
    0 references
     
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