dPCP (Q84913): Difference between revisions

@@ Property / programmed in @@
-R
@@ Property / programmed in: R / rank @@
-Normal rank
@@ Property / last update @@
-December 2022Timestamp +2022-12-15T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2022-12-15T00:00:00Z
-Timezone
++00:00
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+Gregorian
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 Before
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@@ Property / last update: 15 December 2022 / rank @@
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@@ Property / author @@
-Alfonso de Falco
@@ Property / author: Alfonso de Falco / rank @@
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-MIT license
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-Normal rank
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-File License
@@ Property / copyright license: File License / rank @@
-Normal rank
@@ Property / copyright license: File License / qualifier @@
-URL: https://cran.r-project.org/web/packages/dPCP/LICENSE
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@@ Property / depends on software: R / rank @@
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@@ Property / depends on software: R / qualifier @@
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@@ Property / imports @@
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@@ Property / imports: dbscan / rank @@
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@@ Property / imports @@
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@@ Property / imports @@
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@@ Property / imports: raster / rank @@
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@@ Property / imports @@
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@@ Property / imports: rlist / rank @@
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@@ Property / imports @@
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@@ Property / imports: scales / rank @@
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@@ Property / imports: shiny / rank @@
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@@ Property / imports @@
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@@ Property / imports: shinyjs / rank @@
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@@ Property / imports @@
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@@ Property / imports: stats / rank @@
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@@ Property / imports @@
-stringr
@@ Property / imports: stringr / rank @@
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@@ Property / imports @@
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@@ Property / imports: utils / rank @@
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@@ Property / cites work @@
-dbscan: Fast Density-Based Clustering with R
@@ Property / cites work: dbscan: Fast Density-Based Clustering with R / rank @@
-Normal rank
@@ Property / cites work @@
-Pattern Recognition with Fuzzy Objective Function Algorithms
-Normal rank
@@ Property / software version identifier @@
+.0.3
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+Normal rank
@@ Property / software version identifier: 2.0.1 / qualifier @@
+publication date: 12 August 2023Timestamp +2023-08-12T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
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-Timestamp
++2023-08-12T00:00:00Z
-Timezone
++00:00
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+Gregorian
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@@ Property / programmed in @@
+R
@@ Property / programmed in: R / rank @@
+Normal rank
@@ Property / last update @@
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Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2023-08-12T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
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 Before
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@@ Property / last update: 12 August 2023 / rank @@
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@@ Property / description @@
+The automated clustering and quantification of the digital PCR            data is based on the combination of 'DBSCAN' (Hahsler et al. (2019)            <doi:10.18637/jss.v091.i01>) and 'c-means' (Bezdek et al. (1981)             <doi:10.1007/978-1-4757-0450-1>) algorithms.            The analysis is independent of multiplexing geometry, dPCR system,             and input amount.            The details about input data and parameters are available in the            vignette.
+Normal rank
@@ Property / author @@
+Alfonso de Falco
@@ Property / author: Alfonso de Falco / rank @@
+Normal rank
@@ Property / copyright license @@
+MIT license
@@ Property / copyright license: MIT license / rank @@
+Normal rank
@@ Property / copyright license @@
+File License
@@ Property / copyright license: File License / rank @@
+Normal rank
@@ Property / copyright license: File License / qualifier @@
+URL: https://cran.r-project.org/web/packages/dPCP/LICENSE
@@ Property / depends on software @@
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@@ Property / depends on software: R / rank @@
+Normal rank
@@ Property / depends on software: R / qualifier @@
+software version identifier: ≥ 4.0.0
@@ Property / imports @@
+cluster
@@ Property / imports: cluster / rank @@
+Normal rank
@@ Property / imports @@
+dbscan
@@ Property / imports: dbscan / rank @@
+Normal rank
@@ Property / imports @@
+e1071
@@ Property / imports: e1071 / rank @@
+Normal rank
@@ Property / imports @@
+exactci
@@ Property / imports: exactci / rank @@
+Normal rank
@@ Property / imports @@
+ggplot2
@@ Property / imports: ggplot2 / rank @@
+Normal rank
@@ Property / imports @@
+ggpubr
@@ Property / imports: ggpubr / rank @@
+Normal rank
@@ Property / imports @@
+graphics
@@ Property / imports: graphics / rank @@
+Normal rank
@@ Property / imports @@
+raster
@@ Property / imports: raster / rank @@
+Normal rank
@@ Property / imports @@
+rlist
@@ Property / imports: rlist / rank @@
+Normal rank
@@ Property / imports @@
+scales
@@ Property / imports: scales / rank @@
+Normal rank
@@ Property / imports @@
+shiny
@@ Property / imports: shiny / rank @@
+Normal rank
@@ Property / imports @@
+shinyjs
@@ Property / imports: shinyjs / rank @@
+Normal rank
@@ Property / imports @@
+stats
@@ Property / imports: stats / rank @@
+Normal rank
@@ Property / imports @@
+stringr
@@ Property / imports: stringr / rank @@
+Normal rank
@@ Property / imports @@
+utils
@@ Property / imports: utils / rank @@
+Normal rank
@@ Property / cites work @@
+dbscan: Fast Density-Based Clustering with R
@@ Property / cites work: dbscan: Fast Density-Based Clustering with R / rank @@
+Normal rank
@@ Property / cites work @@
+Pattern Recognition with Fuzzy Objective Function Algorithms
+Normal rank
@@ Property / MaRDI profile type @@
+MaRDI software profile
@@ Property / MaRDI profile type: MaRDI software profile / rank @@
+Normal rank
@@ links / mardi / name / links / mardi / name @@
+Software:84913

Latest revision as of 18:56, 12 March 2024

Automated Analysis of Multiplex Digital PCR Data

Language	Label	Description	Also known as
English	dPCP	Automated Analysis of Multiplex Digital PCR Data

Statements

instance of

R package

0 references

software version identifier

2.0.0

publication date

15 December 2022

0 references

1.0.3

publication date

25 September 2020

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1.0.4

publication date

29 July 2021

0 references

2.0.1

publication date

12 August 2023

0 references

0 references

0 references

12 August 2023

0 references

description

The automated clustering and quantification of the digital PCR data is based on the combination of 'DBSCAN' (Hahsler et al. (2019) <doi:10.18637/jss.v091.i01>) and 'c-means' (Bezdek et al. (1981) <doi:10.1007/978-1-4757-0450-1>) algorithms. The analysis is independent of multiplexing geometry, dPCR system, and input amount. The details about input data and parameters are available in the vignette.

0 references

0 references

0 references

https://cran.r-project.org/web/packages/dPCP/LICENSE

0 references

depends on software