Template:Workflow: Difference between revisions

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{{#if: {{#invoke:Wd|label|raw|}} | {{Template:Badge|[[Help:MaRDI QID|MaRDI QID]]|https://portal.mardi4nfdi.de/wiki/Item:{{#invoke:Wd|label|raw|}}|{{#invoke:Wd|label|raw|}}}} }}
{{#if: {{#invoke:Wd|label|raw|}} | {{Template:Badge|[[Help:MaRDI QID|MaRDI QID]]|https://portal.mardi4nfdi.de/wiki/Item:{{#invoke:Wd|label|raw|}}|{{#invoke:Wd|label|raw|}}}} }}


== Problem Statement ==
== Problem statement ==
{{#invoke:Wd|property|P1604|}}
{{#invoke:Wd|property|P1604|}}


=== Object of Research and Objective ===
=== Object of research and objective ===
{{#invoke:wd|description}}
{{#invoke:wd|description}}


=== Involved Disciplines ===
=== Involved disciplines ===
<ol>{{#invoke:wd|properties|P437|format=<li>%p</li>}}</ol>
<ol>{{#invoke:wd|properties|P437|format=<li>%p</li>}}</ol>


== Process Information ==
== Model ==
=== Process Steps ===
<div class="no-pagination no-filter">
{{#sparql:
PREFIX mdb: <https://mardi4nfdi.de/mathmoddb#>
 
SELECT ?Label ?Description ?Time ?Space WHERE {
  wd:{{#invoke:Wd|label|raw|}} wdt:P557 ?item .
  ?item wdt:P31 wd:Q68663;
        wdt:P188 ?url;
        rdfs:label ?Label.
  SERVICE <https://sparql.mtsr2024.m1.mardi.ovh/mathalgodb/query> {
        ?url rdfs:comment ?Description;
        OPTIONAL {?url mdb:isTimeContinuous ?isTimeContinuous.}
          BIND(
                IF(BOUND(?isTimeContinuous),
                IF(?isTimeContinuous = true, "continuous", "discrete"),
                "independent") AS ?Time )
        OPTIONAL {?url mdb:isSpaceContinuous ?isSpaceContinuous.}
            BIND(
                IF(BOUND(?isSpaceContinuous),
                IF(?isSpaceContinuous = true, "continuous", "discrete"),
                    "independent") AS ?Space )
  }
}
| chart=bordercloud.visualization.DataTable
}}
</div>


=== Variables ===
{{#sparql:
{{#sparql:
SELECT ?Name ?Description
PREFIX mdb: <https://mardi4nfdi.de/mathmoddb#>
       (GROUP_CONCAT(DISTINCT ?inputLabel; separator=", ") AS ?Input)
SELECT ?Name ?Unit ?Symbol ?Task (?Type AS ?Dependency_Type) WHERE {
       (GROUP_CONCAT(DISTINCT ?outputLabel; separator=", ") AS ?Output)
  # Starting from the central item
       (GROUP_CONCAT(DISTINCT ?methodLabel; separator=", ") AS ?Method)
  wd:{{#invoke:Wd|label|raw|}} wdt:P557 ?centralItem .
  ?centralItem wdt:P31 wd:Q68663;
                wdt:P188 ?url;
                rdfs:label ?Label.
 
  # Service query to get tasks and connect them to quantities
  SERVICE <https://sparql.mtsr2024.m1.mardi.ovh/mathalgodb/query> {
        ?url mdb:appliedByTask ?task .
        ?task rdfs:label ?Task .
       
        # Define type based on connection type (Input or Output)
        {
            ?task mdb:containsInput ?item .
            ?item rdfs:label ?Name .
            BIND("independent" AS ?Type)
        }
        UNION
        {
            ?task mdb:containsOutput ?item .
            ?item rdfs:label ?Name .
            BIND("dependent" AS ?Type)
        }
       
        # Filter results to only show defining statements that match the current quantity label
        OPTIONAL {
            ?task mdb:containsFormulation ?formulation .
            ?formulation mdb:inDefiningFormulation ?definingStatement .
 
            # Convert definingStatement to a plain string to strip off datatype markup
            BIND(STR(?definingStatement) AS ?plainStatement)
 
            # Clean up spaces around commas, making the format consistent
            BIND(REPLACE(?plainStatement, "\\s*,\\s*", ",") AS ?cleanedStatement)
 
            # Extract symbol and quantity label
            BIND(STRBEFORE(?cleanedStatement, ",") AS ?Symbolraw)
            BIND(STRAFTER(?cleanedStatement, ",") AS ?quantityLabel)
           
            BIND(REPLACE(?Symbolraw, "\\$", "") AS ?cleanSymbol)
            BIND(CONCAT("&lt;math&gt;", ?cleanSymbol, "&lt;/math&gt;") AS ?Symbol)
         
        }
        BIND(STR(?Name) AS ?plainItemLabel)
        FILTER(?quantityLabel = ?plainItemLabel)     
       
    }
    # Initialize the Unit variable as empty
    BIND("" AS ?Unit)
}
ORDER BY ?taskLabel ?itemLabel
| chart=bordercloud.visualization.DataTable
}}
 
=== Parameters ===
{{#sparql:
PREFIX mdb: <https://mardi4nfdi.de/mathmoddb#>
SELECT ?Name ?Unit ?Symbol WHERE {
  # Starting from the central item
  wd:{{#invoke:Wd|label|raw|}} wdt:P557 ?centralItem .
  ?centralItem wdt:P31 wd:Q68663;
                wdt:P188 ?url;
                rdfs:label ?Label.
 
  # Service query to get tasks and connect them to parameters
  SERVICE <https://sparql.mtsr2024.m1.mardi.ovh/mathalgodb/query> {
        ?url mdb:appliedByTask ?task .
        ?task rdfs:label ?Task .
       
        # Retrieve parameters associated with the task
        ?task mdb:containsParameter ?item .
        ?item rdfs:label ?Name .
       
        # Filter results to only show defining statements that match the current quantity label
        OPTIONAL {
            ?task mdb:containsFormulation ?formulation .
            ?formulation mdb:inDefiningFormulation ?definingStatement .
 
            # Convert definingStatement to a plain string to strip off datatype markup
            BIND(STR(?definingStatement) AS ?plainStatement)
 
            # Clean up spaces around commas, making the format consistent
            BIND(REPLACE(?plainStatement, "\\s*,\\s*", ",") AS ?cleanedStatement)
 
            # Extract symbol and quantity label
            BIND(STRBEFORE(?cleanedStatement, ",") AS ?Symbolraw)
            BIND(STRAFTER(?cleanedStatement, ",") AS ?quantityLabel)
           
            BIND(REPLACE(?Symbolraw, "\\$", "") AS ?cleanSymbol)
            BIND(CONCAT("&lt;math&gt;", ?cleanSymbol, "&lt;/math&gt;") AS ?Symbol)
        }
 
        # Initialize the Unit variable as empty
        BIND("" AS ?Unit)
    }
}
ORDER BY ?Name
| chart=bordercloud.visualization.DataTable
}}
 
== Process information ==
=== Process steps ===
<div class="no-pagination no-filter">
{{#sparql:
SELECT ?Number
      ?Name
      ?Description
       (GROUP_CONCAT(DISTINCT ?inputLink; separator=", ") AS ?Input)
       (GROUP_CONCAT(DISTINCT ?outputLink; separator=", ") AS ?Output)
       (GROUP_CONCAT(DISTINCT ?methodLink; separator=", ") AS ?Method)
       (GROUP_CONCAT(DISTINCT ?environmentLabel; separator=", ") AS ?Environment)
       (GROUP_CONCAT(DISTINCT ?environmentLabel; separator=", ") AS ?Environment)
       (GROUP_CONCAT(DISTINCT ?disciplineLabel; separator=", ") AS ?Discipline)
       (GROUP_CONCAT(DISTINCT ?disciplineLink; separator=", ") AS ?Discipline)


WHERE {
WHERE {
    
    
   # Get Step Label and Description
   # Get Step Label and Description
   wd:{{#invoke:Wd|label|raw|}} wdt:P557 ?stepID.
   wd:{{#invoke:Wd|label|raw|}} p:P557 ?mainStatement.
  ?mainStatement ps:P557 ?stepID.  
   ?stepID wdt:P31 wd:Q6486603.             
   ?stepID wdt:P31 wd:Q6486603.             
   ?stepID rdfs:label ?Name.               
   ?stepID rdfs:label ?NameLabel.               
   FILTER (lang(?Name) = 'en')
   FILTER (lang(?NameLabel) = 'en')
  BIND(replace( xsd:string(?stepID),
      'https://portal.mardi4nfdi.de/entity/',
      '') as ?qid) 
 
  BIND (CONCAT('<a href=\'/wiki/Item:',?qid,'\'>',?NameLabel,'</a>') as ?Name)
 
  ?mainStatement pq:P146 ?Number.
 
   OPTIONAL {
   OPTIONAL {
     ?stepID schema:description ?Description.
     ?stepID schema:description ?Description.
     FILTER (lang(?Description) = 'en')
     FILTER (lang(?Description) = 'en')
   }
   }
 
 
   # Get Step Input(s)
   # Get Step Input(s)
   OPTIONAL {
   OPTIONAL {
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     ?inputID rdfs:label ?inputLabel.
     ?inputID rdfs:label ?inputLabel.
     FILTER (lang(?inputLabel) = 'en')
     FILTER (lang(?inputLabel) = 'en')
    BIND(replace( xsd:string(?inputID),
      'https://portal.mardi4nfdi.de/entity/',
      '') as ?inputQID)
    BIND (CONCAT('<a href=\'/wiki/Item:',?inputQID,'\'>',?inputLabel,'</a>') as ?inputLink)
   }
   }
 
 
   # Get Step Output(s)
   # Get Step Output(s)
   OPTIONAL {
   OPTIONAL {
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     ?outputID rdfs:label ?outputLabel.
     ?outputID rdfs:label ?outputLabel.
     FILTER (lang(?outputLabel) = 'en')
     FILTER (lang(?outputLabel) = 'en')
    BIND(replace( xsd:string(?outputID),
      'https://portal.mardi4nfdi.de/entity/',
      '') as ?outputQID)
    BIND (CONCAT('<a href=\'/wiki/Item:',?outputQID,'\'>',?outputLabel,'</a>') as ?outputLink)
   }
   }
 
 
   # Get Step Method(s)
   # Get Step Method(s)
   OPTIONAL {
   OPTIONAL {
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     ?methodID rdfs:label ?methodLabel.
     ?methodID rdfs:label ?methodLabel.
     FILTER (lang(?methodLabel) = 'en')
     FILTER (lang(?methodLabel) = 'en')
    BIND(replace( xsd:string(?methodID),
      'https://portal.mardi4nfdi.de/entity/',
      '') as ?methodQID)
    BIND (CONCAT('<a href=\'/wiki/Item:',?methodQID,'\'>',?methodLabel,'</a>') as ?methodLink)
   }
   }
 
 
   # Get Step Environment(s)
   # Get Step Environment(s)
   OPTIONAL {
   OPTIONAL {
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     FILTER (lang(?environmentLabel) = 'en')
     FILTER (lang(?environmentLabel) = 'en')
   }
   }
 
 
   # Get Step Discipline
   # Get Step Discipline
   OPTIONAL {
   OPTIONAL {
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     ?fieldID rdfs:label ?fieldLabel.
     ?fieldID rdfs:label ?fieldLabel.
     FILTER (lang(?fieldLabel) = 'en')
     FILTER (lang(?fieldLabel) = 'en')
    BIND(replace( xsd:string(?fieldID),
      'https://portal.mardi4nfdi.de/entity/',
      '') as ?fieldQID)
    BIND (CONCAT('<a href=\'/wiki/Item:',?fieldQID,'\'>',?fieldLabel,'</a>') as ?fieldLink)
   }
   }
   OPTIONAL {
   OPTIONAL {
     ?stepID wdt:P226 ?mscID.
     ?stepID wdt:P226 ?mscID.
   }
   }
   BIND(COALESCE(?fieldLabel, ?mscID) AS ?disciplineLabel)
   BIND(COALESCE(?fieldLink, ?mscID) AS ?disciplineLink)
 
} GROUP BY ?Name ?Description ?Number
ORDER BY ASC(?Number)
| chart=bordercloud.visualization.DataTable
| options=width=100%!
}}
</div>
=== Applied methods ===
<div class='no-pagination no-filter'>
{{#sparql:
SELECT ?ID
      ?Name
      ?Description
      (GROUP_CONCAT(DISTINCT ?stepLink; separator=", ") AS ?ProcessStep)
      (GROUP_CONCAT(DISTINCT ?softwareLink; separator=", ") AS ?ImplementedBy)
     
WHERE {
 
  # Get Method Label and Description
  wd:{{#invoke:Wd|label|raw|}} p:P557 ?mainStatement.
  ?mainStatement ps:P557 ?methodID.
  ?methodID wdt:P31 wd:Q68669.
  ?methodID rdfs:label ?NameLabel.             
  FILTER (lang(?NameLabel) = 'en')
  BIND(replace( xsd:string(?methodID),
      'https://portal.mardi4nfdi.de/entity/',
      '') as ?qid)
 
  BIND (CONCAT('mardi:','<a href=\'/wiki/Item:',?qid,'\'>',?qid,'</a>') as ?ID)
  BIND (CONCAT('<a href=\'/wiki/Item:',?qid,'\'>',?NameLabel,'</a>') as ?Name)
 
  OPTIONAL {
    ?methodID schema:description ?Description.
    FILTER (lang(?Description) = 'en')
  }
 
  # Get Software
  OPTIONAL {
    ?mainStatement pq:P147 ?softwareID.
    ?softwareID rdfs:label ?softwareLabel.
    FILTER (lang(?softwareLabel) = 'en')
    BIND(replace( xsd:string(?softwareID),
        'https://portal.mardi4nfdi.de/entity/',
        '') as ?softwareQID) 
 
    BIND (CONCAT('<a href=\'/wiki/Item:',?softwareQID,'\'>',?softwareLabel,'</a>') as ?softwareLink)
  }
 
  # Get Process Step
  OPTIONAL {
    ?stepID wdt:P557 ?methodID.
    ?stepID rdfs:label ?stepLabel.
    FILTER (lang(?stepLabel) = 'en')
    BIND(replace( xsd:string(?stepID),
      'https://portal.mardi4nfdi.de/entity/',
      '') as ?stepQID)
    BIND (CONCAT('<a href=\'/wiki/Item:',?stepQID,'\'>',?stepLabel,'</a>') as ?stepLink)
  }
}
GROUP BY ?ID ?Name ?Description
| chart=bordercloud.visualization.DataTable
| options=width=100%!
}}
</div>


=== Software used ===
<div class='no-pagination no-filter'>
{{#sparql:
SELECT ?ID
      ?Name
      ?Description
      ?Version
      (GROUP_CONCAT(DISTINCT ?plLink; separator=", ") AS ?ProgrammingLanguage)
     
WHERE {
 
  # Get Software Label and Description
  wd:{{#invoke:Wd|label|raw|}} p:P557 ?mainStatement.
  ?mainStatement ps:P557 ?softwareID.
  ?softwareID wdt:P1460 wd:Q5976450.
  ?softwareID rdfs:label ?NameLabel.             
  FILTER (lang(?NameLabel) = 'en')
  BIND(replace( xsd:string(?softwareID),
      'https://portal.mardi4nfdi.de/entity/',
      '') as ?qid)
 
  BIND (CONCAT('mardi:','<a href=\'/wiki/Item:',?qid,'\'>',?qid,'</a>') as ?ID)
  BIND (CONCAT('<a href=\'/wiki/Item:',?qid,'\'>',?NameLabel,'</a>') as ?Name)
 
  OPTIONAL {
    ?softwareID schema:description ?Description.
    FILTER (lang(?Description) = 'en')
  }
 
  # Get Software Version
  OPTIONAL {
    ?mainStatement pq:P132 ?Version.
    }
   
  # Get Programming Language
  OPTIONAL {
    ?softwareID wdt:P114 ?plID.
    ?plID rdfs:label ?plLabel.
    FILTER (lang(?plLabel) = 'en')
    BIND(replace( xsd:string(?plID),
      'https://portal.mardi4nfdi.de/entity/',
      '') as ?plQID)
    BIND (CONCAT('<a href=\'/wiki/Item:',?plQID,'\'>',?plLabel,'</a>') as ?plLink)
  }
}
GROUP BY ?ID ?Name ?Description ?Version
| chart=bordercloud.visualization.DataTable
| options=width=100%!
}}
</div>
=== Hardware ===
<div class='no-pagination no-filter'>
{{#sparql:
SELECT ?ID
      ?Name
      ?Description
      (GROUP_CONCAT(DISTINCT ?processorLink; separator=", ") AS ?Processor)
      (GROUP_CONCAT(DISTINCT ?nodes; separator=", ") AS ?NumberOfNodes)
      (GROUP_CONCAT(DISTINCT ?cores; separator=", ") AS ?NumberOfCores)
     
WHERE {
 
  # Get Hardware Label and Description
  wd:{{#invoke:Wd|label|raw|}} p:P557 ?mainStatement.
  ?mainStatement ps:P557 ?hardwareID.
  ?hardwareID wdt:P31 wd:Q56583.
  ?hardwareID rdfs:label ?NameLabel.             
  FILTER (lang(?NameLabel) = 'en')
  BIND(replace( xsd:string(?hardwareID),
      'https://portal.mardi4nfdi.de/entity/',
      '') as ?qid)
 
  BIND (CONCAT('mardi:','<a href=\'/wiki/Item:',?qid,'\'>',?qid,'</a>') as ?ID)
  BIND (CONCAT('<a href=\'/wiki/Item:',?qid,'\'>',?NameLabel,'</a>') as ?Name)
 
  OPTIONAL {
    ?hardwareID schema:description ?Description.
    FILTER (lang(?Description) = 'en')
  }
 
    # Get Processors(s), Nodes and Cores
  OPTIONAL {
    ?hardwareID p:P1540 ?mainStatement2.
    ?mainStatement2 ps:P1540 ?processorID.
    ?processorID rdfs:label ?processorLabel.
    ?processorID wdt:P1565 ?cores.
    FILTER (lang(?processorLabel) = 'en')
    BIND(replace( xsd:string(?processorID),
      'https://portal.mardi4nfdi.de/entity/',
      '') as ?processorQID)
    BIND (CONCAT('<a href=\'/wiki/Item:',?processorQID,'\'>',?processorLabel,'</a>') as ?processorLink)
    # Get Number of Nodes
    OPTIONAL {
        ?mainStatement2 pq:P149 ?nodes.
    }
  }
 
}
}
GROUP BY ?Name ?Description
GROUP BY ?ID ?Name ?Description
| headers = Name,Description,Input,Output,Method,Parameter,Environment,Discipline
| chart=bordercloud.visualization.DataTable
| options=width=100%!
}}
}}
</div>
=== Input data ===
=== Output data ===

Latest revision as of 12:02, 31 October 2024


Available identifiers

Problem statement

Object of research and objective

Involved disciplines

    Model

    Variables

    Parameters

    Process information

    Process steps

    Applied methods

    Software used

    Hardware

    Input data

    Output data

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