Coherent modelling switch between pointwise and distributed representations of cell aggregates (Q515830): Difference between revisions
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Property / DOI | |||
Property / DOI: 10.1007/s00285-016-1042-0 / rank | |||
Property / author | |||
Property / author: Annachiara Colombi / rank | |||
Property / author | |||
Property / author: Marco Scianna / rank | |||
Property / author | |||
Property / author: Luigi Preziosi / rank | |||
Property / review text | |||
The authors consider the set of clones, as aggregates of \(N(t)\) typical particles defined in \(\Omega \subset \mathbb{R}^2\) by the vector \[ X(t)=\{x_1(t),x_2(t),\dots,x_{N(t)}(t),\},\;N(t)\in \mathbb{N} \eqno{(1)} \] with spatial mass density distribution \(\rho(t,y): \mathbb{R}\times \Omega \to \mathbb{R}_+\) such that \[ \int\limits_{\Omega}\rho(t,\mathbf{y})dy=M(t), \; \;\forall t. \eqno{(2)} \] Many additional properties of these clones allow to obtain the system of ODEs (local form of mass balance equation) \[ \frac{dx_j(t)}{dt}=v_L(x_j(t)),\;j=1,\dots,N_L(t), \] \[ \frac{\partial\rho(t,\mathbf{y})}{\partial t}+\nabla\cdot(\rho(t,yv_D(t,y))=\Gamma (t,y), \eqno{(3)} \] where \(x_j\) and \(\rho\) are defined in (1), (2) and \(v_L,\;v_D\) are the velocity of the two cell clones, respectively. Thus the equation (3) represent modeling of clones interaction dynamics -- the model of tumor growth. In conclusion, biologically relevant numerical realizations are presented: they deal with the growth of a tumor spheroid and with the initial differentiation stages of the formation of the zebrafish posterior lateral line. Both phenomena mainly rely on cell phenotypic transition and differentiated behavior, thereby constituting biological systems particularly suitable to assess the advantages of the proposed model. | |||
Property / review text: The authors consider the set of clones, as aggregates of \(N(t)\) typical particles defined in \(\Omega \subset \mathbb{R}^2\) by the vector \[ X(t)=\{x_1(t),x_2(t),\dots,x_{N(t)}(t),\},\;N(t)\in \mathbb{N} \eqno{(1)} \] with spatial mass density distribution \(\rho(t,y): \mathbb{R}\times \Omega \to \mathbb{R}_+\) such that \[ \int\limits_{\Omega}\rho(t,\mathbf{y})dy=M(t), \; \;\forall t. \eqno{(2)} \] Many additional properties of these clones allow to obtain the system of ODEs (local form of mass balance equation) \[ \frac{dx_j(t)}{dt}=v_L(x_j(t)),\;j=1,\dots,N_L(t), \] \[ \frac{\partial\rho(t,\mathbf{y})}{\partial t}+\nabla\cdot(\rho(t,yv_D(t,y))=\Gamma (t,y), \eqno{(3)} \] where \(x_j\) and \(\rho\) are defined in (1), (2) and \(v_L,\;v_D\) are the velocity of the two cell clones, respectively. Thus the equation (3) represent modeling of clones interaction dynamics -- the model of tumor growth. In conclusion, biologically relevant numerical realizations are presented: they deal with the growth of a tumor spheroid and with the initial differentiation stages of the formation of the zebrafish posterior lateral line. Both phenomena mainly rely on cell phenotypic transition and differentiated behavior, thereby constituting biological systems particularly suitable to assess the advantages of the proposed model. / rank | |||
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Property / Mathematics Subject Classification ID | |||
Property / Mathematics Subject Classification ID: 35Q70 / rank | |||
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Property / Mathematics Subject Classification ID | |||
Property / Mathematics Subject Classification ID: 35Q92 / rank | |||
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Property / Mathematics Subject Classification ID | |||
Property / Mathematics Subject Classification ID: 92C17 / rank | |||
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Property / Mathematics Subject Classification ID | |||
Property / Mathematics Subject Classification ID: 92C37 / rank | |||
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Property / zbMATH DE Number | |||
Property / zbMATH DE Number: 6695806 / rank | |||
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Property / zbMATH Keywords | |||
multiscale modeling | |||
Property / zbMATH Keywords: multiscale modeling / rank | |||
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hybrid systems | |||
Property / zbMATH Keywords: hybrid systems / rank | |||
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cell differentiation | |||
Property / zbMATH Keywords: cell differentiation / rank | |||
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cell phenotypic transition | |||
Property / zbMATH Keywords: cell phenotypic transition / rank | |||
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multiscale dynamics | |||
Property / zbMATH Keywords: multiscale dynamics / rank | |||
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Property / Wikidata QID | |||
Property / Wikidata QID: Q48156590 / rank | |||
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Property / author | |||
Property / author: Annachiara Colombi / rank | |||
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Property / author | |||
Property / author: Marco Scianna / rank | |||
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Property / author | |||
Property / author: Luigi Preziosi / rank | |||
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Property / reviewed by | |||
Property / reviewed by: Boris Vladimirovich Loginov / rank | |||
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Property / MaRDI profile type | |||
Property / MaRDI profile type: MaRDI publication profile / rank | |||
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Property / OpenAlex ID | |||
Property / OpenAlex ID: W2461943535 / rank | |||
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Property / cites work | |||
Property / cites work: A continuum approach to modelling cell-cell adhesion / rank | |||
Normal rank | |||
Property / cites work | |||
Property / cites work: Adding adhesion to a chemical signaling model for somite formation / rank | |||
Normal rank | |||
Property / cites work | |||
Property / cites work: Differentiated cell behavior: a multiscale approach using measure theory / rank | |||
Normal rank | |||
Property / cites work | |||
Property / cites work: A Measure-Theoretic Model for Collective Cell Migration and Aggregation / rank | |||
Normal rank | |||
Property / cites work | |||
Property / cites work: A hybrid mathematical model for self-organizing cell migration in the zebrafish lateral line / rank | |||
Normal rank | |||
Property / cites work | |||
Property / cites work: Global nonexistence for a semilinear Petrovsky equation / rank | |||
Normal rank | |||
Property / cites work | |||
Property / cites work: A nonlocal model for contact attraction and repulsion in heterogeneous cell populations / rank | |||
Normal rank | |||
Property / cites work | |||
Property / cites work: A review of mathematical models for the formation of vascular networks / rank | |||
Normal rank | |||
Property / cites work | |||
Property / cites work: Multiscale Developments of the Cellular Potts Model / rank | |||
Normal rank | |||
Property / cites work | |||
Property / cites work: Three-dimensional multispecies nonlinear tumor growth. I: Model and numerical method / rank | |||
Normal rank | |||
Property / DOI | |||
Property / DOI: 10.1007/S00285-016-1042-0 / rank | |||
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links / mardi / name | links / mardi / name | ||
Latest revision as of 20:07, 9 December 2024
scientific article
Language | Label | Description | Also known as |
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English | Coherent modelling switch between pointwise and distributed representations of cell aggregates |
scientific article |
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Coherent modelling switch between pointwise and distributed representations of cell aggregates (English)
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17 March 2017
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The authors consider the set of clones, as aggregates of \(N(t)\) typical particles defined in \(\Omega \subset \mathbb{R}^2\) by the vector \[ X(t)=\{x_1(t),x_2(t),\dots,x_{N(t)}(t),\},\;N(t)\in \mathbb{N} \eqno{(1)} \] with spatial mass density distribution \(\rho(t,y): \mathbb{R}\times \Omega \to \mathbb{R}_+\) such that \[ \int\limits_{\Omega}\rho(t,\mathbf{y})dy=M(t), \; \;\forall t. \eqno{(2)} \] Many additional properties of these clones allow to obtain the system of ODEs (local form of mass balance equation) \[ \frac{dx_j(t)}{dt}=v_L(x_j(t)),\;j=1,\dots,N_L(t), \] \[ \frac{\partial\rho(t,\mathbf{y})}{\partial t}+\nabla\cdot(\rho(t,yv_D(t,y))=\Gamma (t,y), \eqno{(3)} \] where \(x_j\) and \(\rho\) are defined in (1), (2) and \(v_L,\;v_D\) are the velocity of the two cell clones, respectively. Thus the equation (3) represent modeling of clones interaction dynamics -- the model of tumor growth. In conclusion, biologically relevant numerical realizations are presented: they deal with the growth of a tumor spheroid and with the initial differentiation stages of the formation of the zebrafish posterior lateral line. Both phenomena mainly rely on cell phenotypic transition and differentiated behavior, thereby constituting biological systems particularly suitable to assess the advantages of the proposed model.
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multiscale modeling
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hybrid systems
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cell differentiation
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cell phenotypic transition
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multiscale dynamics
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