directPA (Q133040): Difference between revisions

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@@ Property / last update @@
-November 2020Timestamp +2020-11-16T00:00:00Z
Timezone +00:00
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@@ Property / last update: 16 November 2020 / rank @@
-Normal rank
@@ Property / maintained by @@
-Pengyi Yang
@@ Property / maintained by: Pengyi Yang / rank @@
-Normal rank
@@ Property / software version identifier @@
+.0
@@ Property / software version identifier: 1.0 / rank @@
+Normal rank
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@@ Property / software version identifier: 1.4 / rank @@
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+publication date: 7 November 2019Timestamp +2019-11-07T00:00:00Z
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@@ Property / software version identifier: 1.5.1 / rank @@
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+publication date: 16 November 2023Timestamp +2023-11-16T00:00:00Z
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@@ Property / last update: 16 November 2023 / rank @@
+Normal rank
@@ Property / maintained by @@
+Pengyi Yang
@@ Property / maintained by: Pengyi Yang / rank @@
+Normal rank
@@ Property / description @@
+Direction analysis is a set of tools designed to identify    combinatorial effects of multiple treatments/conditions on pathways    and kinases profiled by microarray, RNA-seq, proteomics, or phosphoproteomics    data. See Yang P et al (2014) <doi:10.1093/bioinformatics/btt616>; and Yang P et al. (2016) <doi:10.1002/pmic.201600068>.
+Normal rank
@@ Property / copyright license @@
+GNU General Public License, version 3.0
@@ Property / copyright license: GNU General Public License, version 3.0 / rank @@
+Normal rank
@@ Property / depends on software @@
+R
@@ Property / depends on software: R / rank @@
+Normal rank
@@ Property / depends on software: R / qualifier @@
+software version identifier: ≥ 3.10.0
@@ Property / imports @@
+grDevices
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@@ Property / imports @@
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@@ Property / imports @@
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@@ Property / imports @@
+plotly
@@ Property / imports: plotly / rank @@
+Normal rank
@@ Property / imports @@
+calibrate
@@ Property / imports: calibrate / rank @@
+Normal rank
@@ Property / cites work @@
+Direction pathway analysis of large-scale proteomics data reveals novel features of the insulin action pathway
+Normal rank
@@ Property / cites work @@
+KinasePA: Phosphoproteomics data annotation using hypothesis driven kinase perturbation analysis
+Normal rank

Revision as of 11:52, 29 February 2024

Direction Analysis for Pathways and Kinases

Language	Label	Description	Also known as
English	directPA	Direction Analysis for Pathways and Kinases

Statements

instance of

R package

0 references

software version identifier

1.5

publication date

16 November 2020

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1.0

publication date

22 October 2013

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1.1

publication date

20 March 2015

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1.2

publication date

18 June 2015

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1.3

publication date

23 March 2016

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1.4

publication date

7 November 2019

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1.5.1

publication date

16 November 2023

0 references

0 references

0 references

16 November 2023

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maintained by

Pengyi Yang

0 references

description

Direction analysis is a set of tools designed to identify combinatorial effects of multiple treatments/conditions on pathways and kinases profiled by microarray, RNA-seq, proteomics, or phosphoproteomics data. See Yang P et al (2014) <doi:10.1093/bioinformatics/btt616>; and Yang P et al. (2016) <doi:10.1002/pmic.201600068>.

0 references

copyright license

GNU General Public License, version 3.0

0 references

depends on software

R

software version identifier

≥ 3.10.0

0 references

imports

grDevices

0 references