Fast profile matching algorithms - A survey (Q932308): Difference between revisions

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+Replacing suffix trees with enhanced suffix arrays
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+Efficient string matching
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+Q4849531
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+Biological Sequence Analysis
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+Q4055156
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+Some string matching problems from bioinformatics which still need better solutions
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+Algorithms on Strings, Trees and Sequences
@@ Property / cites work: Algorithms on Strings, Trees and Sequences / rank @@
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+Linear-Time Construction of Suffix Arrays
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+Space Efficient Linear Time Construction of Suffix Arrays
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+Q4449231
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+Large Scale Matching for Position Weight Matrices
@@ Property / cites work: Large Scale Matching for Position Weight Matrices / rank @@
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+A Space-Economical Suffix Tree Construction Algorithm
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+Q4534878
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+On the Power of Profiles for Transcription Factor Binding Site Detection
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+On-line construction of suffix trees
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+Compression of individual sequences via variable-rate coding
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