The following pages link to VMD (Q30483):
Displayed 50 items.
- Accuracy limits of the blob model for a flexible polymer confined inside a cylindrical nano-channel (Q300609) (← links)
- Folding of multi-layer graphene sheets induced by van der Waals interaction (Q318427) (← links)
- SDPBS web server for calculation of electrostatics of ionic solvated biomolecules (Q326615) (← links)
- A treecode-accelerated boundary integral Poisson-Boltzmann solver for electrostatics of solvated biomolecules (Q347826) (← links)
- Numerical methods for the Poisson-Fermi equation in electrolytes (Q347829) (← links)
- A stochastic thermostat algorithm for coarse-grained thermomechanical modeling of large-scale soft matters: theory and application to microfilaments (Q348905) (← links)
- Multiscale universal interface: a concurrent framework for coupling heterogeneous solvers (Q350122) (← links)
- Atomistic insights into dislocation-based mechanisms of void growth and coalescence (Q361472) (← links)
- Combined grain size, strain rate and loading condition effects on mechanical behavior of nanocrystalline Cu under high strain rates (Q399557) (← links)
- Implication of crystal water molecules in inhibitor binding at ALR2 active site (Q428257) (← links)
- Multiscale modeling using goal-oriented adaptivity and numerical homogenization. I: Mathematical formulation and numerical results (Q438158) (← links)
- Co-evolution and information signals in biological sequences (Q534561) (← links)
- Armchair or Zigzag? A tool for characterizing graphene edge (Q538582) (← links)
- Fast analysis of molecular dynamics trajectories with graphics processing units -- radial distribution function histogramming (Q543778) (← links)
- A study of mechanical properties of pure and nitrogen-doped ultrananocrystalline diamond films under various loading conditions (Q545034) (← links)
- Browndye: A software package for Brownian dynamics (Q548955) (← links)
- Molecular dynamics simulation of peeling a DNA molecule on substrate (Q612473) (← links)
- Minimal formulation of joint motion for biomechanisms (Q619558) (← links)
- Visualization in Medicine and Life Sciences II. Progress and New Challenges. Selected papers based on the presentations at the second international workshop, VMLS, Bremerhaven, Germany, June 22--24, 2009 (Q639386) (← links)
- Adaptive multiscale modeling of polymeric materials with Arlequin coupling and goals algorithms (Q658177) (← links)
- Metadynamics study of mutant human interferon-gamma forms (Q692256) (← links)
- Coupled applications on distributed resources (Q709973) (← links)
- The loading history and crystal orientation effects on the size-dependency of single crystal diamond properties (Q836174) (← links)
- Hydrophobic collapse in (in silico) protein folding (Q849523) (← links)
- A boundary element formulation of protein electrostatics with explicit ions (Q876460) (← links)
- Molecular dynamics simulation study on the structural stabilities of polyglutamine peptides (Q936066) (← links)
- PROSIGN: a method for protein secondary structure assignment based on three-dimensional coordinates of consecutive \(C_\alpha \) atoms (Q1004951) (← links)
- Large deformation and fracture mechanics of a beta-helical protein nanotube: Atomistic and continuum modeling (Q1013868) (← links)
- Analyses of tensile deformation of nanocrystalline \(\alpha-\text{Fe}_2\text{O}_3+fcc-\)Al composites using molecular dynamics simulations (Q1025777) (← links)
- Modelling excess surface energy in dry and wetted calcite systems (Q1037474) (← links)
- Algorithmic challenges in computational molecular biophysics (Q1305945) (← links)
- NAMD2: Greater scalability for parallel molecular dynamics (Q1305980) (← links)
- Large-scale molecular dynamics simulation of flow under complex structure of endothelial glycocalyx (Q1615490) (← links)
- SDPhound, a mutual information-based method to investigate specificity-determining positions (Q1662480) (← links)
- A fast mollified impulse method for biomolecular atomistic simulations (Q1685170) (← links)
- Understanding the intracellular-to-extracellular localization switch of polyhydroxybutyrate polymerase in \textit{Pseudomonas} backgrounds as a microevolutionary process (Q1714355) (← links)
- Insights into the molecular mechanisms of protein-ligand interactions by molecular docking and molecular dynamics simulation: a case of oligopeptide binding protein (Q1728795) (← links)
- A novel canonical dual computational approach for prion AGAAAAGA amyloid fibril molecular modeling (Q1786044) (← links)
- Analyzing the sequence-structure relationship of a library of local structural prototypes (Q1798732) (← links)
- Biomolecular electrostatics using a fast multipole BEM on up to 512 GPUs and a billion unknowns (Q1943150) (← links)
- Myoglobin ligand gate mechanism analysis by a novel 3D visualization technique (Q2000926) (← links)
- Using sacrificial cell spheroids for the bioprinting of perfusable 3D tissue and organ constructs: a computational study (Q2003682) (← links)
- Evolutionary de Rham-Hodge method (Q2033767) (← links)
- Viral capsid nanoindentation simulations using octree-type data structures (Q2079320) (← links)
- Topological data analysis for the energy and stability of endohedral metallofullerenes (Q2118775) (← links)
- Periodic boundary conditions for arbitrary deformations in molecular dynamics simulations (Q2122237) (← links)
- Dynamic pull-in instability of multilayer graphene NEMSs: non-classical continuum model and molecular dynamics simulations (Q2132702) (← links)
- Molecular advection-diffusion through graphene nanopores (Q2134622) (← links)
- Using computational approaches to study dengue virus capsid assembly (Q2183355) (← links)
- A comparative molecular dynamics-phase-field modeling approach to brittle fracture (Q2308704) (← links)