Seurat (Q57419)

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Tools for Single Cell Genomics
Language Label Description Also known as
English
Seurat
Tools for Single Cell Genomics

    Statements

    instance of
    R package
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    programmed in
    R
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    last update
    18 November 2022
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    software version identifier
    4.3.0
    publication date
    18 November 2022
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    author
    Paul J Hoffman
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    depends on software
    R
    software version identifier
    ≥ 4.0.0
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    methods
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    imports
    cluster
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    cowplot
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    fitdistrplus
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    future
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    future.apply
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    ggplot2
    software version identifier
    ≥ 3.3.0
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    ggrepel
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    ggridges
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    graphics
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    grDevices
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    grid
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    httr
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    ica
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    igraph
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    irlba
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    jsonlite
    0 references
    KernSmooth
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    leiden
    software version identifier
    ≥ 0.3.1
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    lmtest
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    MASS
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    Matrix
    software version identifier
    ≥ 1.5-0
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    matrixStats
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    miniUI
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    patchwork
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    pbapply
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    plotly
    software version identifier
    ≥ 4.9.0
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    png
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    progressr
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    RANN
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    RColorBrewer
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    Rcpp
    software version identifier
    ≥ 1.0.7
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    RcppAnnoy
    software version identifier
    ≥ 0.0.18
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    reticulate
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    rlang
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    ROCR
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    Rtsne
    0 references
    scales
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    sctransform
    software version identifier
    ≥ 0.3.5
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    SeuratObject
    software version identifier
    ≥ 4.1.3
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    shiny
    0 references
    spatstat.explore
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    spatstat.geom
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    stats
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    tibble
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    tools
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    utils
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    uwot
    software version identifier
    ≥ 0.1.14
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    CRAN project
    Seurat
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    Wikidata QID
    Q85699649
    0 references
     
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