A Brownian dynamics model of kinesin in three dimensions incorporating the force-extension profile of the coiled-coil cargo tether

DOI10.1007/S11538-005-9003-6zbMath1334.92128arXiv0910.5753OpenAlexW3104481665WikidataQ33247734 ScholiaQ33247734MaRDI QIDQ263576

Charles S. Peskin, Paul J. Atzberger

Publication date: 5 April 2016

Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/0910.5753

zbMATH Keywords

stochastic processes statistical mechanics Brownian dynamics kinesin molecular motor protein

Mathematics Subject Classification ID

Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.) (92C45) Biochemistry, molecular biology (92C40) Applications of Brownian motions and diffusion theory (population genetics, absorption problems, etc.) (60J70)

Related Items (10)

Renewal-reward process formulation of motor protein dynamics ⋮ Impact of noise on the regulation of intracellular transport of intermediate filaments ⋮ A first-passage kinetic Monte Carlo method for reaction-drift-diffusion processes ⋮ A stochastic immersed boundary method for fluid-structure dynamics at microscopic length scales ⋮ Kinesins with extended neck linkers: A chemomechanical model for variable-length stepping ⋮ Estimating velocity for processive motor proteins with random detachment ⋮ Stochastic mechanochemical description of a bioinspired polymerization process ⋮ An immersed boundary neural network for solving elliptic equations with singular forces on arbitrary domains ⋮ A matrix computational approach to kinesin neck linker extension ⋮ Bidirectional sliding of two parallel microtubules generated by multiple identical motors

Cites Work

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