SDPBS web server for calculation of electrostatics of ionic solvated biomolecules
Publication:326615
DOI10.1515/MLBMB-2015-0011zbMath1347.92025OpenAlexW2581213389WikidataQ130194282 ScholiaQ130194282MaRDI QIDQ326615
Zeyun Yu, Dexuan Xie, Jinyong Ying, Yi Jiang, Yang Xie
Publication date: 12 October 2016
Published in: Molecular Based Mathematical Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1515/mlbmb-2015-0011
finite element methodcomputer graphicsPoisson-Boltzmann equationelectrostatic potentialinteractive visualization
Computer graphics; computational geometry (digital and algorithmic aspects) (68U05) Biochemistry, molecular biology (92C40) Mathematical aspects of software engineering (specification, verification, metrics, requirements, etc.) (68N30)
Related Items (6)
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Cites Work
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- A treecode-accelerated boundary integral Poisson-Boltzmann solver for electrostatics of solvated biomolecules
- New solution decomposition and minimization schemes for Poisson-Boltzmann equation in calculation of biomolecular electrostatics
- A new analysis of electrostatic free energy minimization and Poisson-Boltzmann equation for protein in ionic solvent
- Automated solution of differential equations by the finite element method. The FEniCS book
- Accurate evaluation of electrostatics for macromolecules in solution
- A new linear Poisson-Boltzmann equation and finite element solver by solution decomposition approach
- A new finite element and finite difference hybrid method for computing electrostatics of ionic solvated biomolecule
- ``New-version-fast-multipole-method accelerated electrostatic calculations in biomolecular sys\-tems
- A new minimization protocol for solving nonlinear Poisson-Boltzmann mortar finite element equation
- A nonlinear elasticity model of macromolecular conformational change induced by electrostatic forces
- A Fast Solver for a Nonlocal Dielectric Continuum Model
- Adaptive Finite Element Modeling Techniques for the Poisson-Boltzmann Equation
- DelPhi Web Server: A Comprehensive Online Suite for Electrostatic Calculations of Biological Macromolecules and Their Complexes
- Efficient and Qualified Mesh Generation for Gaussian Molecular Surface Using Adaptive Partition and Piecewise Polynomial Approximation
- The Finite Element Approximation of the Nonlinear Poisson–Boltzmann Equation
- Efficient Algorithms for a Nonlocal Dielectric Model for Protein in Ionic Solvent
- A Poisson-Boltzmann equation test model for protein in spherical solute region and its applications
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