The combinatorics of tandem duplication

DOI10.1016/j.dam.2015.05.014zbMath1319.05009arXiv1402.0104OpenAlexW1528552012MaRDI QIDQ494419

Taoyang Wu, Luca Penso-Dolfin, Chris D. Greenman

Publication date: 1 September 2015

Published in: Discrete Applied Mathematics (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1402.0104

zbMATH Keywords

combinatoricsrearrangementsposetsevolutiontandem duplication

Mathematics Subject Classification ID

Combinatorics on words (68R15) Permutations, words, matrices (05A05) Protein sequences, DNA sequences (92D20)

Related Items (1)

The complexity of genome rearrangement combinatorics under the infinite sites model

Cites Work

• Unnamed Item
• Unnamed Item
• Modeling the evolution space of breakage fusion bridge cycles with a stochastic folding process
• Posets and permutations in the duplication-loss model: minimal permutations with \(d\) descents
• A variant of the tandem duplication-random loss model of genome rearrangement
• Multinomial convolution polynomials
• On the conductance of order Markov chains
• Counting linear extensions
• Tandem cyclic alignment
• A SURVEY ON ALGORITHMIC ASPECTS OF TANDEM REPEATS EVOLUTION
• Multidimensional binary search trees used for associative searching
• Automatic Sequences

This page was built for publication: The combinatorics of tandem duplication