Analysis and design of molecular machines

DOI10.1016/j.tcs.2015.01.030zbMath1329.68105DBLPjournals/tcs/AngioneCCLN15OpenAlexW2007057676WikidataQ59131536 ScholiaQ59131536MaRDI QIDQ498934

G. Carapezza, J. Costanza, Giuseppe Nicosia, Pietro Lio, Claudio Angione

Publication date: 29 September 2015

Published in: Theoretical Computer Science (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.tcs.2015.01.030

zbMATH Keywords

Petri netsPareto optimalityTuring machine\textit{E. coli} modellingbiological complexityflux-balance analysismolecular machineregister machinestrade-off genetic strategiesvon Neumann architectures

Mathematics Subject Classification ID

Modes of computation (nondeterministic, parallel, interactive, probabilistic, etc.) (68Q10) Models and methods for concurrent and distributed computing (process algebras, bisimulation, transition nets, etc.) (68Q85) Systems biology, networks (92C42)

Related Items (1)

Metabolic pathway analysis using a Nash equilibrium approach

Uses Software

• QSSPN

Cites Work

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• Petri nets for modelling metabolic pathways: a survey
• Confusion of memory
• The complexity of small universal Turing machines: A survey
• Computation with finite stochastic chemical reaction networks
• The computational power of Benenson automata
• From Turing machines to computer viruses
• Weak Time Petri Nets Strike Back!
• Computation in gene networks

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