Bayesian multivariate Poisson abundance models for T-cell receptor data

DOI10.1016/j.jtbi.2013.02.009zbMath1322.92014OpenAlexW1996257718WikidataQ30596900 ScholiaQ30596900MaRDI QIDQ745050

Joshua Greene, Leszek Ignatowicz, Marc R. Birtwistle, Grzegorz A. Rempała

Publication date: 13 October 2015

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: http://europepmc.org/articles/pmc3972257

zbMATH Keywords

MAP estimationlognormal distributionPoisson abundance modelsspecies diversity estimationT-cell antigen receptors

Mathematics Subject Classification ID

Bayesian inference (62F15) Medical applications (general) (92C50)

Related Items (1)

The role of the T-helper/T-suppressor ratio in the adaptive immune response: a dynamical model

Uses Software

• R
• sedaR
• JAGS

Cites Work

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• An introduction to MCMC for machine learning
• Inference from iterative simulation using multiple sequences
• Model for comparative analysis of antigen receptor repertoires
• A Bayesian \(\chi^2\) test for goodness-of-fit
• On Fitting the Poisson Lognormal Distribution to Species-Abundance Data
• The multivariate Poisson-log normal distribution
• Bayesian Estimation of the Number of Species using Noninformative Priors
• Estimating the Size of a Multinomial Population
• Estimating the number of component processes of a superimposed process

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