Inference of the stochastic MAPK pathway by modified diffusion bridge method

DOI10.1007/s10100-012-0237-8zbMath1397.92226OpenAlexW1994319856MaRDI QIDQ1788913

Vilda Purutçuoğlu

Publication date: 9 October 2018

Published in: CEJOR. Central European Journal of Operations Research (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s10100-012-0237-8

zbMATH Keywords

Markov chain Monte Carlomodified diffusion bridge algorithmoperations research in computational biology

Mathematics Subject Classification ID

Monte Carlo methods (65C05) Applications of Markov chains and discrete-time Markov processes on general state spaces (social mobility, learning theory, industrial processes, etc.) (60J20) Biochemistry, molecular biology (92C40) Applications of Brownian motions and diffusion theory (population genetics, absorption problems, etc.) (60J70) Computational methods for problems pertaining to biology (92-08)

Related Items (1)

Extended lasso-type MARS (LMARS) model in the description of biological network

Uses Software

• glasso

Cites Work

• Sparse inverse covariance estimation with the graphical lasso
• Analysis of high dimensional multivariate stochastic volatility models
• Bayesian inference for nonlinear multivariate diffusion models observed with error
• Weak convergence and optimal scaling of random walk Metropolis algorithms
• High-dimensional graphs and variable selection with the Lasso
• Bayesian inference for the MAPK/ERK pathway by considering the dependency of the kinetic parameters
• An algorithmic approach to analyse genetic networks and biological energy production: an introduction and contribution where OR meets biology†
• Bayesian Inference for Stochastic Kinetic Models Using a Diffusion Approximation
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