Finding predictive gene groups from microarray data

DOI10.1016/J.JMVA.2004.02.012zbMath1047.62103OpenAlexW2024765216MaRDI QIDQ1876985

Marcel Dettling

Publication date: 16 August 2004

Published in: Journal of Multivariate Analysis (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jmva.2004.02.012

zbMATH Keywords

Gene expressionDimension reductionPenalized logistic regressionSample classification

Mathematics Subject Classification ID

Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10) Generalized linear models (logistic models) (62J12) Genetics and epigenetics (92D10)

Related Items (19)

Grouping Variable Selection by Weight Fused Elastic Net for Multi-Collinear Data ⋮ Relative-error approximate versions of Douglas-Rachford splitting and special cases of the ADMM ⋮ Max-linear regression models with regularization ⋮ Discrimination and scoring using small sets of genes for two-sample microarray data ⋮ Correlated variables in regression: clustering and sparse estimation ⋮ Approximate ADMM algorithms derived from Lagrangian splitting ⋮ Deriving solution value bounds from the ADMM ⋮ The Kendall interaction filter for variable interaction screening in high dimensional classification problems ⋮ A diagonally scaled Newton-type proximal method for minimization of the models with nonsmooth composite cost functions ⋮ Sparse regression with exact clustering ⋮ Nonparametric significance testing and group variable selection ⋮ A clustering-based feature selection method for automatically generated relational attributes ⋮ Regularization and Variable Selection Via the Elastic Net ⋮ Treelets -- an adaptive multi-scale basis for sparse unordered data ⋮ Boosting for high-dimensional linear models ⋮ Simultaneous Regression Shrinkage, Variable Selection, and Supervised Clustering of Predictors with OSCAR ⋮ A Robust Maximal F-Ratio Statistic to Detect Clusters Structure ⋮ Relative-error inertial-relaxed inexact versions of Douglas-Rachford and ADMM splitting algorithms ⋮ Discussion of: Treelets -- an adaptive multi-scale basis for sparse unordered data

Cites Work

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• Estimating the Number of Clusters in a Data Set Via the Gap Statistic
• 10.1162/15324430152733133
• Comparison of Discrimination Methods for the Classification of Tumors Using Gene Expression Data
• Ridge Estimators in Logistic Regression
• Ridge Regression: Biased Estimation for Nonorthogonal Problems
• Classification of gene microarrays by penalized logistic regression

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