Network translation and steady-state properties of chemical reaction systems

DOI10.1007/s11538-018-0458-7zbMath1400.92217arXiv1710.10637OpenAlexW2962959192WikidataQ90830412 ScholiaQ90830412MaRDI QIDQ1990142

Matthew D. Johnston, Elisa Tonello

Publication date: 24 October 2018

Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1710.10637

zbMATH Keywords

linear programmingrobustnessdynamical systemsmass action systemsbiochemical reaction graph

Mathematics Subject Classification ID

Programming involving graphs or networks (90C35) Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.) (92C45) Systems biology, networks (92C42)

Related Items (8)

Absolute concentration robustness in networks with low-dimensional stoichiometric subspace ⋮ A deficiency-based approach to parametrizing positive equilibria of biochemical reaction systems ⋮ Computing weakly reversible deficiency zero network translations using elementary flux modes ⋮ Computational Translation Framework Identifies Biochemical Reaction Networks with Special Topologies and Their Long-Term Dynamics ⋮ Bifunctional enzyme provides absolute concentration robustness in multisite covalent modification networks ⋮ Sufficient Conditions for Linear Stability of Complex-Balanced Equilibria in Generalized Mass-Action Systems ⋮ On the Bijectivity of Families of Exponential/Generalized Polynomial Maps ⋮ Analysis of mass-action systems by split network translation

Cites Work

• Complex-linear invariants of biochemical networks
• Chemical reaction systems with toric steady states
• Translated chemical reaction networks
• Toric dynamical systems
• A computational approach to steady state correspondence of regular and generalized mass action systems
• The existence and uniqueness of steady states for a class of chemical reaction networks
• Multiple steady states for chemical reaction networks of deficiency one
• On the relation between reactions and complexes of (bio)chemical reaction networks
• Mathematical Models in Population Biology and Epidemiology
• Generalized Mass Action Systems: Complex Balancing Equilibria and Sign Vectors of the Stoichiometric and Kinetic-Order Subspaces
• Finite Time Distributions of Stochastically Modeled Chemical Systems with Absolute Concentration Robustness
• Sign conditions for injectivity of generalized polynomial maps with applications to chemical reaction networks and real algebraic geometry

This page was built for publication: Network translation and steady-state properties of chemical reaction systems