Bayesian bi-clustering methods with applications in computational biology

DOI10.1214/22-AOAS1622zbMath1498.62128arXiv2007.06136MaRDI QIDQ2080793

Yanyan Li

Publication date: 10 October 2022

Published in: The Annals of Applied Statistics (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/2007.06136

zbMATH Keywords

genetics; model selection; clustering; high dimensionality; variable selection; categorical data; bi-clustering

Mathematics Subject Classification ID

62H30: Classification and discrimination; cluster analysis (statistical aspects)

62P10: Applications of statistics to biology and medical sciences; meta analysis

62F15: Bayesian inference

Uses Software

• PLINK
• STRUCTURE
• VarSelLCM
• FABIA
• SC3

Cites Work

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• Reversible jump Markov chain Monte Carlo computation and Bayesian model determination
• Variable selection for model-based clustering using the integrated complete-data likelihood
• Model-based methods to identify multiple cluster structures in a data set
• Identifiability of parameters in latent structure models with many observed variables
• Estimating the dimension of a model
• A tractable multi-partitions clustering
• Hierarchical clustering schemes
• Variable selection in clustering via Dirichlet process mixture models
• Biclustering via Sparse Singular Value Decomposition
• Marginal Likelihood from the Gibbs Output
• Subset Clustering of Binary Sequences, with an Application to Genomic Abnormality Data
• The Collapsed Gibbs Sampler in Bayesian Computations with Applications to a Gene Regulation Problem
• 10.1162/jmlr.2003.3.4-5.993
• Bayesian Variable Selection in Clustering High-Dimensional Data
• Variable Selection for Model-Based Clustering
• Estimation and selection for the latent block model on categorical data
• Model-based subspace clustering