Gain-loss-duplication models for copy number evolution on a phylogeny: exact algorithms for computing the likelihood and its gradient

DOI10.1016/j.tpb.2022.03.003OpenAlexW4220729817MaRDI QIDQ2152690

Miklós Csűrös

Publication date: 11 July 2022

Published in: Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/2107.11440

zbMATH Keywords

maximum likelihoodbirth-death-immigration processgenome evolutiongene contentphyletic profile

Mathematics Subject Classification ID

Biology and other natural sciences (92-XX)

Cites Work

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• A Probabilistic Model for Gene Content Evolution with Duplication, Loss, and Horizontal Transfer
• Estimation for General Birth-Death Processes
• A Combinatorial Method in the Theory of Queues

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