Parameter reconstruction for biochemical networks using interval analysis

DOI10.1007/s11155-006-9009-2zbMath1098.65082MaRDI QIDQ2503182

Warwick Tucker, Vincent L. Moulton

Publication date: 14 September 2006

Published in: Reliable Computing (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s11155-006-9009-2

zbMATH Keywords

inverse problem; numerical examples; interval analysis; metabolic networks; genetic networks; biochemical networks; parameter reconstruction; S-systems; nonlinear parameter fitting; signal transduction cascades

Mathematics Subject Classification ID

92E20: Classical flows, reactions, etc. in chemistry

65G40: General methods in interval analysis

34A55: Inverse problems involving ordinary differential equations

65L09: Numerical solution of inverse problems involving ordinary differential equations

Related Items

Biochemical systems theory: a review, An algorithm for continuous piecewise linear bounding of discrete time series data, Rigorous parameter reconstruction for differential equations with noisy data, Wirtinger-type integral inequalities for interval-valued functions, Recent developments in parameter estimation and structure identification of biochemical and genomic systems, Parameter estimation for metabolic networks with two stage Bregman regularization homotopy inversion algorithm

Uses Software

• PROFIL/BIAS

Cites Work

• Consistency techniques in ordinary differential equations
• Interval Methods for Systems of Equations
• A note on the rate of convergence to equilibrium for Erlang's model in the subcritical case
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