Differential Expression and Network Inferences through Functional Data Modeling

DOI10.1111/J.1541-0420.2008.01159.XzbMath1172.62062OpenAlexW1974271203WikidataQ33389324 ScholiaQ33389324MaRDI QIDQ3183219

Martin Gleave, Colleen Nelson, Ruth Etzioni, Mauricio Neira, Donatello Telesca, Lurdes Y. T. Inoue

Publication date: 19 October 2009

Published in: Biometrics (Search for Journal in Brave)

Full work available at URL: http://europepmc.org/articles/pmc2956129

zbMATH Keywords

differential expressiongene networksBayesian hierarchical modelfunctional datatime transformationtime course microarray datafunctional similarity

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Bayesian inference (62F15) Medical applications (general) (92C50) Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10) Testing in survival analysis and censored data (62N03)

Related Items (5)

Nonparametric trend estimation in functional time series with application to annual mortality rates ⋮ A Bayesian hierarchical model for inference across related reverse phase protein arrays experiments ⋮ Modeling Protein Expression and Protein Signaling Pathways ⋮ Bayesian Analysis of Curves Shape Variation Through Registration and Regression ⋮ Time course analysis of microarray data for the pathway of reproductive development in female rainbow trout

Uses Software

• GeneNet

Cites Work

• Unnamed Item
• Unnamed Item
• Flexible smoothing with \(B\)-splines and penalties. With comments and a rejoinder by the authors
• Time ordering of gene coexpression
• Self Modeling with Flexible, Random Time Transformations
• Bayesian Hierarchical Curve Registration
• Curve Registration
• B-splines and optimal stability
• Optimal Sample Size for Multiple Testing
• Self-Modelling Warping Functions
• A Statistical Framework for Expression-Based Molecular Classification in Cancer
• Cluster-based network model for time-course gene expression data
• A Bayesian Approach to Estimation and Testing in Time-course Microarray Experiments
• Bayesian Hierarchical Modeling for Time Course Microarray Experiments

This page was built for publication: Differential Expression and Network Inferences through Functional Data Modeling