PLNmodels
Software:76219
Poisson Lognormal Models
François Gindraud, Julien Chiquet, Stéphane Robin, Mahendra Mariadassou
Last update: 8 January 2024
Copyright license: GNU General Public License
Software version identifier: 1.0.1, 0.9.2, 0.9.3, 0.9.4, 0.9.5, 0.10.5, 0.10.6, 0.11.4, 0.11.5, 0.11.6, 0.11.7, 1.0.0, 1.0.2, 1.0.3, 1.0.4, 1.1.0
The Poisson-lognormal model and variants (Chiquet, Mariadassou and Robin, 2021 <doi:10.3389/fevo.2021.588292>) can be used for a variety of multivariate problems when count data are at play, including principal component analysis for count data, discriminant analysis, model-based clustering and network inference. Implements variational algorithms to fit such models accompanied with a set of functions for visualization and diagnostic.
