bbknnR (Q95736)

From MaRDI portal
Revision as of 19:56, 12 March 2024 by Import240312060351 (talk | contribs) (Added link to MaRDI item.)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Perform Batch Balanced KNN in R
Language Label Description Also known as
English
bbknnR
Perform Batch Balanced KNN in R

    Statements

    instance of
    R package
    0 references
    software version identifier
    1.0.2
    publication date
    23 September 2022
    0 references
    1.0.0
    publication date
    27 May 2022
    0 references
    1.0.1
    publication date
    23 August 2022
    0 references
    1.1.0
    publication date
    20 November 2023
    0 references
    1.1.1
    publication date
    13 February 2024
    0 references
    maintained by
    Yuchen Li
    0 references
    CRAN project
    bbknnR
    0 references
    programmed in
    R
    0 references
    last update
    13 February 2024
    0 references
    description
    A fast and intuitive batch effect removal tool for single-cell data. BBKNN is originally used in the 'scanpy' python package, and now can be used with 'Seurat' seamlessly.
    0 references
    author
    Yuchen Li
    0 references
    depends on software
    methods
    0 references
    utils
    0 references
    R
    software version identifier
    ≥ 4.1.0
    0 references
    imports
    future
    0 references
    glmnet
    0 references
    Matrix
    0 references
    magrittr
    0 references
    Rcpp
    0 references
    RcppAnnoy
    0 references
    reticulate
    0 references
    rlang
    0 references
    Rtsne
    0 references
    Seurat
    0 references
    SeuratObject
    0 references
    tidytable
    0 references
    uwot
    software version identifier
    ≥ 0.1.14
    0 references
     
    Retrieved from "https://portal.mardi4nfdi.de/w/index.php?title=Item:Q95736&oldid=30807747"
    Powered by MediaWiki