CytoSimplex

CRANCytoSimplexMaRDI QIDQ5978857

Simplex Visualization of Cell Fate Similarity in Single-Cell Data

Jialin Liu, Yichen Wang

Last update: 15 December 2023

Copyright license: GNU General Public License, version 3.0

Software version identifier: 0.1.0, 0.1.1

Description

Create simplex plots to visualize the similarity between single-cells and selected clusters in a 1-/2-/3-simplex space. Velocity information can be added as an additional layer. See Liu J, Wang Y et al (2023) <doi:10.1101/2023.12.07.570655> for more details.

Cites work

• CytoSimplex: Visualizing Single-cell Fates and Transitions on a Simplex