Positive and negative cycles in Boolean networks (Q1717061)

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Language	Label	Description	Also known as
English	Positive and negative cycles in Boolean networks	scientific article

Statements

scholarly article

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Positive and negative cycles in Boolean networks (English)

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Journal of Theoretical Biology

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publication date

6 February 2019

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full work available at URL

https://arxiv.org/abs/2201.08600

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zbMATH Keywords

Boolean networks

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gene networks

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positive and negative feedback cycles

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describes a project that uses

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MaRDI profile type

MaRDI publication profile

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Asynchronous threshold networks

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Maximum number of fixed points in regulatory Boolean networks

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Maximum number of fixed points in AND-OR-NOT networks

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Fixed points in conjunctive networks and maximal independent sets in graph contractions

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Number of Fixed Points and Disjoint Cycles in Monotone Boolean Networks

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Application of formal methods to biological regulatory networks: extending Thomas' asynchronous logical approach with temporal logic

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Connectivity and dynamics for random subgraphs of the directed cube

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``Immunetworks'', intersecting circuits and dynamics

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Combinatorics of Boolean automata circuits dynamics

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On recursively directed hypercubes

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On a lemma of Littlewood and Offord

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A circuit-preserving mapping from multilevel to Boolean dynamics

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On the rank and periodic rank of finite dynamical systems

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Reduction and Fixed Points of Boolean Networks and Linear Network Coding Solvability

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Fixed Points of Boolean Networks, Guessing Graphs, and Coding Theory

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Graph-Theoretical Constructions for Graph Entropy and Network Coding Based Communications

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Comportement périodique des fonctions à seuil binaires et applications

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Asynchronous Dynamics of Boolean Automata Double-Cycles

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On the Convergence of Boolean Automata Networks without Negative Cycles

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Asynchronous Simulation of Boolean Networks by Monotone Boolean Networks

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On periodical behaviour in societies with symmetric influences

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Packing directed circuits

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Graphic requirements for multistability and attractive cycles in a Boolean dynamical framework

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An extension of a combinatorial fixed point theorem of Shih and Dong

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Positive circuits and maximal number of fixed points in discrete dynamical systems

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Negative circuits and sustained oscillations in asynchronous automata networks

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Local negative circuits and fixed points in non-expansive Boolean networks

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Fixed point theorems for Boolean networks expressed in terms of forbidden subnetworks

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Fixed points and connections between positive and negative cycles in Boolean networks

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Necessary conditions for multistationarity in discrete dynamical systems

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Stable periodicity and negative circuits in differential systems

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From kernels in directed graphs to fixed points and negative cycles in Boolean networks

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Information flows, graphs and their guessing numbers

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Itérations sur des ensembles finis et automates cellulaires contractants

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Discrete dynamical systems

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Permanents, Pfaffian orientations, and even directed circuits

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Negative local feedbacks in Boolean networks

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Packing directed circuits fractionally

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A combinatorial analogue of the Jacobian problem in automata networks

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Solution of the Boolean Markus-Yamabe problem

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Qualitative dynamics of piecewise-linear differential equations: a discrete mapping approach

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Logical identification of all steady states: The concept of feedback loop characteristic states

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Multistationarity, the basis of cell differentiation and memory. I. Structural conditions of multistationarity and other nontrivial behavior

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Multistationarity, the basis of cell differentiation and memory. II. Logical analysis of regulatory networks in terms of feedback circuits

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Identifiers

zbMATH Open document ID

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10.1016/j.jtbi.2018.11.028

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Mathematics Subject Classification ID

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zbMATH DE Number

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Sitelinks

Mathematics(1 entry)

mardi Publication:1717061

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