AMISforInfectiousDiseases

MaRDI QIDQ7386060CRANFDO

Authors Evandro Konzen, Renata Retkute, Raiha Browning, Simon Spencer, Thilbault Lestang

Last update 20 January 2025

Copyright license MIT license, File License

Software version identifier 0.1.0

Description

Implements the Adaptive Multiple Importance Sampling (AMIS) algorithm, as described by Retkute et al. (2021, <doi:10.1214/21-AOAS1486>), to estimate key epidemiological parameters by combining outputs from a geostatistical model of infectious diseases (such as prevalence, incidence, or relative risk) with a disease transmission model. Utilising the resulting posterior distributions, the package enables forward projections at the local level.

Cites work

• Integrating geostatistical maps and infectious disease transmission models using adaptive multiple importance sampling

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