A GRASP metaheuristic for microarray data analysis

DOI10.1016/J.COR.2012.10.008MaRDI QIDQ336713zbMATH OpenOpenAlexFDO

Authors Roberto Cordone, Guglielmo Lulli

Publication date 10 November 2016

Published in Computers \& Operations Research (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.cor.2012.10.008

zbMATH Keywords

gene regulatory networkstabu searchpath relinkingGRASPDNA microarray data

Mathematics Subject Classification ID

Approximation methods and heuristics in mathematical programming (90C59) Protein sequences, DNA sequences (92D20) Combinatorial optimization (90C27) Software, source code, etc. for problems pertaining to operations research and mathematical programming (90-04)

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Cites work

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• A hybrid heuristic for the \(p\)-median problem
• A mathematical program to refine gene regulatory networks
• A probabilistic heuristic for a computationally difficult set covering problem
• An integer optimization approach for reverse engineering of gene regulatory networks
• Fundamentals of scatter search and path relinking
• Future paths for integer programming and links to artificial intelligence
• Greedy randomized adaptive search procedures
• Identifying gene regulatory networks from experimental data
• Probability distribution of solution time in GRASP: an experimental investigation
• Random Graphs
• Random graphs.
• Reactive GRASP: An Application to a Matrix Decomposition Problem in TDMA Traffic Assignment

Cited in

(3)

• The multimode covering location problem
• An integer optimization approach for reverse engineering of gene regulatory networks
• A variable neighborhood search algorithm for the multimode set covering problem

Describes a project that uses

Uses Software

• Tabu search
• Scatter Search

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