A new challenge for compression algorithms: Genetic sequences

DOI10.1016/0306-4573(94)90014-0MaRDI QIDQ1345812zbMATH OpenOpenAlexFDO

Authors Stéphane Grumbach, Fariza Tahi

Publication date 30 May 1995

Published in Information Processing and Management (Search for Journal in Brave)

Full work available at URL https://hal.inria.fr/inria-00180949/file/grumbach.pdf

zbMATH Keywords

biocompress-2comprehension of genetic sequencescompression of DNApalindromes

Mathematics Subject Classification ID

Data encryption (aspects in computer science) (68P25) Theory of data (68P99) Software, source code, etc. for problems pertaining to biology (92-04) Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20)

Recommendations

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Cited in

(11)

• Data compression and learning in time sequences analysis
• Phylogenetic analysis of DNA sequences based on the generalized pseudo-amino acid composition
• Comparison between text compression algorithms in biological sequences
• Bacterial DNA sequence compression models using artificial neural networks
• Efficient storage of massive biological sequences in compact form
• De Novo NGS Data Compression
• Searching for smallest grammars on large sequences and application to DNA
• Textual data compression in computational biology: algorithmic techniques
• Artificial sequences and complexity measures
• Combinatorial Pattern Matching
• The use of genetic programming for adaptive text compression

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