A simple method of identifying symmetric substructures of proteins

DOI10.1016/J.COMPBIOLCHEM.2008.07.026MaRDI QIDQ1005019zbMATH OpenOpenAlexWikidataFDO

Authors Yanzhao Huang, Yi Xiao, Hanlin Chen

Publication date 12 March 2009

Published in Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.compbiolchem.2008.07.026

zbMATH Keywords

Pearson's correlationsimilarity matrixdRMSDstructural symmetry

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40)

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Cites work

• A common sequence-associated physicochemical feature for proteins of beta-trefoil family
• Hidden symmetries in the primary sequences of beta-barrel family

Cited in

(4)

• Conformation and sequence evidence for two-fold symmetry in left-handed beta-helix fold
• Extended Abstract: Structure Determination of Symmetric Protein Complexes by a Complete Search of Symmetry Configuration Space Using NMR Distance Restraints
• Nonlinear analysis of sequence symmetry of beta-trefoil family proteins
• scientific article; zbMATH DE number 3879157 (Why is no real title available?)

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Uses Software

• DISTAN

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