An RNA folding algorithm including pseudoknots based on dynamic weighted matching

DOI10.1016/J.COMPBIOLCHEM.2005.10.001MaRDI QIDQ2490526zbMATH OpenOpenAlexWikidataFDO

Authors Haijun Liu, Dong Xu, Jianlin Shao, Yifei Wang

Publication date 16 May 2006

Published in Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.compbiolchem.2005.10.001

zbMATH Keywords

Dynamic weighted matchingPseudoknotsRNA secondary structure

Mathematics Subject Classification ID

Computational methods for problems pertaining to biology (92-08) Biochemistry, molecular biology (92C40)

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(7)

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• An RNA folding algorithm based on dynamic weighted matching
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• Improved Approximation Algorithms for Predicting RNA Secondary Structures with Arbitrary Pseudoknots
• Computing and Combinatorics
• Automated design of dynamic programming schemes for RNA folding with pseudoknots

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