CNSigs

MaRDI QIDQ7376178CRANFDO

Authors David Tallman

Last update 23 June 2026

Copyright license MIT license, File License

Software version identifier 0.1.0, PACKAGES.rds, 0.1.1

Description

A workflow to generate and analyze signatures based on copy number data using non-negative matrix factorization (NMF) in an approach similar to that used in mutational signatures. It can be used to extract features from Copy number segment data and use that to find a subset of copy number signatures which can be further used to correlate with other relevant data. For more on 'NMF' see Gaujoux (2013) <doi:10.1186/1471-2105-11-367>.

Cites work

• A flexible R package for nonnegative matrix factorization

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