Case-control studies of gene-environment interaction: Bayesian design and analysis

DOI10.1111/J.1541-0420.2009.01357.XMaRDI QIDQ3064290zbMATH OpenOpenAlexWikidataFDO

Authors Bhramar Mukherjee, Jaeil Ahn, Stephen B. Gruber, Malay Ghosh, Nilanjan Chatterjee

Publication date 21 December 2010

Published in Biometrics (Search for Journal in Brave)

Full work available at URL http://europepmc.org/articles/pmc3103064

zbMATH Keywords

case-only designenvironment independencegenehighest posterior density intervalmolecular epidemiology of colorectal cancermultinomial-Dirichletposterior odds

Mathematics Subject Classification ID

Bayesian inference (62F15) Applications of statistics to biology and medical sciences; meta analysis (62P10) Medical applications (general) (92C50)

Recommendations

• Bayesian semiparametric analysis for two-phase studies of gene-environment interaction
• Semiparametric Bayesian analysis of gene-environment interactions with error in measurement of environmental covariates and missing genetic data
• Bayesian Sample Size Determination for Case-Control Studies
• Exploiting Gene‐Environment Independence for Analysis of Case–Control Studies: An Empirical Bayes‐Type Shrinkage Estimator to Trade‐Off between Bias and Efficiency
• Genotype-based Bayesian analysis of gene-environment interactions with multiple genetic markers and misclassification in environmental factors

Cites work

• A Bayesian approach to case-control studies with errors in covariables
• A Bayesian semiparametric model for case-control studies with errors in variables
• A simulation-based approach to Bayesian sample size determination for performance under a given model and for separating models
• Bayesian Sample Size Determination for Case-Control Studies
• Bayesian Semiparametric Modeling for Matched Case–Control Studies with Multiple Disease States
• Contemporary Bayesian Econometrics and Statistics
• Exploiting Gene‐Environment Independence for Analysis of Case–Control Studies: An Empirical Bayes‐Type Shrinkage Estimator to Trade‐Off between Bias and Efficiency
• Optimal Predictive Sample Size for Case–Control Studies
• Robust Bayesian sample size determination for avoiding the range of equivalence in clinical trials
• Sample Size Determination for Robust Bayesian Analysis
• Semiparametric Bayesian Analysis of Case–Control Data under Conditional Gene‐Environment Independence
• Semiparametric Bayesian Analysis of Matched Case-Control Studies With Missing Exposure
• Semiparametric maximum likelihood estimation exploiting gene-environment independence in case-control studies
• The Bayesian Analysis of Contingency Tables
• The exact posterior distribution of the cross-ratio of a 2×2 contingency table

Cited in

(9)

• Jackknife empirical likelihood method for case-control studies with gene-environment independence on controls
• Bayesian semiparametric analysis for two-phase studies of gene-environment interaction
• Effects of gene-environment and gene-gene interactions in case-control studies: a novel Bayesian semiparametric approach
• Semiparametric Bayesian analysis of gene-environment interactions with error in measurement of environmental covariates and missing genetic data
• Genotype-based Bayesian analysis of gene-environment interactions with multiple genetic markers and misclassification in environmental factors
• Bayes factor based on a maximum statistic for case-control genetic association studies
• New perspective on the benefits of the gene–environment independence in case–control studies
• Case-Control Inference of Interaction between Genetic and Nongenetic Risk Factors under Assumptions on Their Distribution
• Bayesian Sample Size Determination for Case-Control Studies

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