Challenges for machine learning in RNA-protein interaction prediction

DOI10.1515/SAGMB-2021-0087MaRDI QIDQ2162489zbMATH OpenOpenAlexFDO

Authors Viplove Arora, Guido Sanguinetti

Publication date 8 August 2022

Published in Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1515/sagmb-2021-0087

zbMATH Keywords

graph neural networksgraphshigher-order interactionsnoisy dataRNA-protein interactions

Mathematics Subject Classification ID

Learning and adaptive systems in artificial intelligence (68T05) Biochemistry, molecular biology (92C40)

Cites work

• A gentle introduction to deep learning for graphs
• Deep learning
• Gene regulatory networks. Methods and protocols
• Measuring reproducibility of high-throughput experiments
• Networks beyond pairwise interactions: structure and dynamics
• Random forests
• Reducing the Dimensionality of Data with Neural Networks
• Support-vector networks

Describes a project that uses

Uses Software

• Puma
• darch
• word2vec
• idr

This page was built for publication: Challenges for machine learning in RNA-protein interaction prediction

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2162489)