clampSeg

MaRDI QIDQ38733swMATHCRANFDO

Authors Pein Florian

Last update 8 October 2026

Copyright license GNU General Public License, version 3.0

Software version identifier 1.0-1, 1.0-3, 1.0-4, 1.0-5, 1.1-0, 1.1-1, PACKAGES.rds, 1.2-0, 1.3-0

Official website https://cran.r-project.org/web/packages/clampSeg/index.html

Source code repository https://github.com/cran/clampSeg

Description

Implements the model-free multiscale idealisation approaches: Jump-Segmentation by MUltiResolution Filter (JSMURF), Hotz et al. (2013) <doi:10.1109/TNB.2013.2284063>, JUmp Local dEconvolution Segmentation filter (JULES), Pein et al. (2018) <doi:10.1109/TNB.2018.2845126>, and Heterogeneous Idealization by Local testing and DEconvolution (HILDE), Pein et al. (2021) <doi:10.1109/TNB.2020.3031202>. Further details on how to use them are given in Pein, Eltzner and Munk (2021) <doi:10.1007/s00249-021-01506-8>.

Cites work

• Analysis of patchclamp recordings: model-free multiscale methods and software
• Fully Automatic Multiresolution Idealization for Filtered Ion Channel Recordings: Flickering Event Detection
• Heterogeneous Idealization of Ion Channel Recordings – Open Channel Noise
• Idealizing Ion Channel Recordings by a Jump Segmentation Multiresolution Filter

Cited in

(1)

• Heterogeneous multiscale change-point inference and its application to ion channel recordings

This page was built for software: clampSeg