Clustering single-cell data based on a deep embedded subspace model

DOI10.1007/S40314-025-03268-XMaRDI QIDQ6940795zbMATH OpenFDO

Authors Zekun Wang, Lei Chen, Hongjia Chen, Xiang Wang

Publication date 19 August 2025

Published in Computational and Applied Mathematics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/S40314-025-03268-X

zbMATH Keywords

deep learningsingle-cell RNA sequencingsubspace clustering

Mathematics Subject Classification ID

Pattern recognition, speech recognition (68T10) General biology and biomathematics (92B05)

Cites work

• scientific article; zbMATH DE number 3340881 (Why is no real title available?)
• Information theoretic measures for clusterings comparison: variants, properties, normalization and correction for chance
• New backward error bounds of Rayleigh–Ritz projection methods for quadratic eigenvalue problem
• On perturbations for spectrum and singular value decompositions followed by deflation techniques
• Proving the stability estimates of variational least-squares kernel-based methods
• Reducing the Dimensionality of Data with Neural Networks
• Solving the quadratic eigenvalue problem expressed in non-monomial bases by the tropical scaling
• Visualizing data using t-SNE

Cited in

(5)

• A high-dimensional feature selection method based on feature interaction clustering and integer-encoded TLBO
• Efficient streaming data clustering guided by self-refined organizing map
• An approach to the clustering problem with capacity constraints
• Spectral clustering based on weighted Gaussian kernel function with local density
• Clustering enhancement in multidimensional space via restricted dissimilarity functions on L^n for rainstorm radar images

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