Codebook Motif Explorer Supplementary Dataset
DOI10.5281/zenodo.10182957Zenodo10182957MaRDI QIDQ6722182FDOQ6722182
Dataset published at Zenodo repository.
Codebook/Greco-Bit Consortium, Jan Grau, Ivo Grosse, Ilya Vorontsov, Vsevolod Makeev, Bart Deplancke, Timothy Hughes, Fedor Kolpakov, Ivan Kulakovskiy, Philipp Bucher
Publication date: 22 November 2023
Copyright license: Creative Commons Attribution 4.0 International
This is the supplementary dataset of the GRECO-BIT/Codebook Motif Explorer (MEX),which is a detailed online catalog of DNA motifs built using a huge collection of experimental dataproduced by the Codebook Consortium to annotate the binding specificities of human transcriptionfactors.Motif discovery for MEX was performed with multiple software tools, and the resulting motifs wererigorously benchmarked against held-out test data. Here you can find detailed benchmarking results,complete motif sets, and the benchmarking-ready preprocessed experimental data.Further details are provided in README.*The version update resolves minor file naming issues in the original upload. The files contents remain the same.Note: There are two extra accompanying Zenodo datasets, namely,doi:10.5281/zenodo.8327477 (MEX HT-SELEX data) and doi:10.5281/zenodo.8327970 (MEX GHT-SELEX data).
This page was built for dataset: Codebook Motif Explorer Supplementary Dataset
