Consensus tissue domain detection in spatial multi-omics data using MILWRM

DOI10.5281/zenodo.10557593ZenodoMaRDI QIDQ6680232FDO

Authors Kaur Harsimran, Heiser Cody, McKinley Eliot, Antunes Lissa Ventura, Coleman Harris, Roland Joseph T., Farrow Melissa A., Pingry Ellie L., Selden Hilary J., Moore John F., Ehrlich Lauren I.r., Shrubsole Martha J., Spraggins Jefferey M., Coffey Robert J., Lau Ken S., Vandekar Simon N.

Copyright license Creative Commons Attribution 4.0 International

Description (long)

The provided dataset contains multiplex immunofluorescence data associated with the publication - Consensus tissue domain detection in spatial multi-omics data using MILWRM. The zip file contains three folders that contain CODEX data on 4 Human Kidney samples, CODEX data on 3 mouse lymph nodes and mIF on patient derived colonic polyps. Each image is a preprocess npz file which is a compressed format which can be easily opened using MILWRM or numpy.

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