DNA fragment assembly using a grid-based genetic algorithm

DOI10.1016/J.COR.2006.12.011MaRDI QIDQ2475840zbMATH OpenOpenAlexFDO

Authors Antonio J. Nebro, Gabriel Luque, Francisco Luna, Enrique Alba

Publication date 11 March 2008

Published in Computers \& Operations Research (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.cor.2006.12.011

zbMATH Keywords

genetic algorithmgrid computing

Mathematics Subject Classification ID

Approximation methods and heuristics in mathematical programming (90C59) Computational methods for problems pertaining to biology (92-08) Biochemistry, molecular biology (92C40)

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Cites work

• A grid-oriented genetic algorithm framework for bioinformatics
• Computational Science - ICCS 2004
• scientific article; zbMATH DE number 1557065 (Why is no real title available?)
• scientific article; zbMATH DE number 2087973 (Why is no real title available?)
• scientific article; zbMATH DE number 960162 (Why is no real title available?)

Cited in

(9)

• DNA paired fragment assembly using graph theory
• A grid-oriented genetic algorithm framework for bioinformatics
• DNA fragments assembly programs: A comparative study
• A Hybrid Genetic Algorithm for the DNA Fragment Assembly Problem
• scientific article; zbMATH DE number 1222692 (Why is no real title available?)
• An Eulerian path approach to DNA fragment assembly
• Parallel metaheuristics: recent advances and new trends
• Nature-inspired novel Cuckoo search algorithm for genome sequence assembly
• Seeding strategies and recombination operators for solving the DNA fragment assembly problem

Describes a project that uses

Uses Software

• CAP3
• Globus Toolkit
• Condor-G
• Phrap

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